Genomics and Genetics
Genomics and Genetics
Software Tool Article
metrics
Peer Reviewers
Berend Snel;
Daofeng Li;
Jung-Wan Mok;
Elise Parey
- Funder
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
Research Article
metrics
Identification of pathogenic-specific open reading frames in staphylococci species
[version 1; peer review: 2 not approved]
Peer Reviewers
Gisela Storz;
Vishnu Raghuram
Research Article
metrics
Revised
The first released available genome of the common ice plant (Mesembryanthemum crystallinum L.) extended the research region on salt tolerance, C3-CAM photosynthetic conversion, and halophilism
[version 4; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Qijie Guan;
Xin-Guang Zhu;
Zbigniew Miszalski
- Funder
- JSPS KAKENHI
Software Tool Article
metrics
Revised
scANANSE gene regulatory network and motif analysis of single-cell clusters
[version 2; peer review: 2 approved]
Peer Reviewers
Kenji Kamimoto;
Marouen Ben Guebila
- Funders
- NWO grant 016 Vidi
- NWO-ALW
- ZonMw Open
Research Article
metrics
Revised
Mutation spectrum analysis of DMD gene in Indonesian Duchenne and Becker muscular dystrophy patients
[version 3; peer review: 2 approved]
Peer Reviewers
Teguh Haryo Sasongko;
Luca Bello
- Funder
- NUS-UGM-Tahir Foundation grant
Genome Note
metrics
Revised
The genome sequence of the critically endangered Kroombit tinkerfrog (Taudactylus pleione)
[version 2; peer review: 3 approved]
Peer Reviewers
Natalie Forsdick;
Sandra Goutte;
Matheus Azambuja
- Funders
- Australian Federal Government Bushfire Recovery Scheme
- Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science
- NCRIS supported Bioplatforms Australia Threatened Species Initiative
Method Article
metrics
Revised
Unraveling the timeline of gene expression: A pseudotemporal trajectory analysis of single-cell RNA sequencing data
[version 2; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Michael D Morgan;
Koen Van den berge;
Anna Alemany, Xuan Quy Nguyen and Noëlle Dommann
- Funders
- National Health and Medical Research Council
- Chan Zuckerberg Initiative
- Medical Research Future Fund
Research Article
metrics
Exploring the genetic landscape of neurotransmitter alterations in hypoxic-ischemic encephalopathy: A personalized medicine perspective
[version 1; peer review: 1 approved with reservations]
Peer Reviewers
Raffaele Falsaperla
- Funder
- Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)
Review
metrics
Revised
Anemonefishes: A model system for evolutionary genomics
[version 2; peer review: 2 approved]
Peer Reviewers
Fabio Cortesi;
Kerstin Johannesson
- Funders
- Okinawa Institute of Science and Technology Graduate University
- Academia Sinica
Research Article
metrics
Revised
Observation of SARS-CoV-2 genome characteristics and clinical manifestations within eight family clusters from GH and GK clades in Jakarta, Indonesia
[version 2; peer review: 2 approved with reservations, 2 not approved]
Peer Reviewers
So Nakagawa;
Serafeim C. Chaintoutis;
Pakorn Aiewsakun;
Gusti N Mahardika
- Funder
- Direktorat Riset and Pengembangan, Universitas Indonesia
Method Article
metrics
Revised
Manual annotation of Drosophila genes: a Genomics Education Partnership protocol
[version 3; peer review: 2 approved]
Peer Reviewers
Terence D. Murphy;
Madeline Crosby
- Funders
- National Institute of General Medical Sciences of the National Institutes of Health
- National Science Foundation
Software Tool Article
metrics
CIViCutils: Matching and downstream processing of clinical annotations from CIViC
[version 1; peer review: 4 approved with reservations]
Peer Reviewers
Kandarp Joshi;
Sayed-Rzgar Hosseini;
Obi L. Griffith;
Marco Punta and Aurora Maurizio
Brief Report
metrics
Revised
Multiomic sequencing of paired primary and metastatic small bowel carcinoids
[version 2; peer review: 2 approved]
Peer Reviewers
Phillip Stafford;
Anela Blažević
- Funder
- WHH Foundation
Research Article
metrics
Shark and ray genome size estimation: methodological optimization for inclusive and controllable biodiversity genomics
[version 1; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers
Jochen Wilhelm;
Nancy Saavedra-Sotelo
- Funders
- RIKEN Center for Biosystems Dynamics Research
- National Institute of Genetics, Japan
- Ministry of Education, Culture, Sports, Science and Technology, Japan
Genome Note
metrics
Revised
Characterization of the Complete Chloroplast Genome of Gaultheria nummularioides D.Don 1825 (Ericaceae)
[version 2; peer review: 2 approved]
Peer Reviewers
Xing Huang;
Hoang Dang Khoa Do
- Funders
- Program Innovative Research Team in Science and Technology in Yunnan Province
- National Natural Science Foundation of China
- Scientific Research Fund Project of Yunnan Education Department
Genome Note
metrics
Complete mitochondrial genome and the phylogenetic position of a new Annelida species belonging to the genus Syllis
[version 1; peer review: 1 approved with reservations, 1 not approved]
Peer Reviewers
Yingdong Li;
Zhi Wang
- Funder
- National Research Foundation
Genome Note
metrics
The complete mitochondrial genome sequence of Rikuzen flounder, Dexistes rikuzenius (Jordan & Starks, 1904)
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Euna Jo;
Michael W Sandel
- Funder
- Korea Institute of Marine Science and Technology promotion
Systematic Review
metrics
Revised
Polymorphism studies and candidate genes associated with litter size traits in Indonesian goats. a systematic review
[version 2; peer review: 1 approved, 1 not approved]
Peer Reviewers
Mohammadreza Mohammadabadi;
Zhanerke Akhatayeva
- Funder
- Universitas Airlangga
Research Article
metrics
Amanita thiersii and Amanita foetens are closely related but genetically and geographically distinct species, leaving the origins of A. thiersii and its range expansion enigmatic
[version 1; peer review: 2 approved with reservations, 1 not approved]
Peer Reviewers
Duur K Aanen;
Julieta Alvarez Manjarrez;
Martin P A Coetzee
- Funders
- Mary Herman Rubinstein and the University of Wisconsin-Madison
- Advanced Opportunity Fellowship from the University of Wisconsin-Madison
- Department of Botany at the University of Wisconsin-Madison
Research Article
metrics
Revised
Genetic diversity and population structure of Capitulum mitella (Linnaeus, 1767) in Fujian (China) revealed by mtDNA COI sequences
[version 2; peer review: 2 approved]
Peer Reviewers
Jun Sun;
Alex Nahnson Nehemia
- Funders
- The Marine Biological Sample Museum
- Department of Science and Technology of Fujian Province, China
- Natural Science Foundation of Xiamen, China