Genomics and Genetics
Genomics and Genetics
Genome Note
metrics
An updated version of the Madagascar periwinkle genome
[version 1; peer review: 2 approved]
Peer Reviewers
Evangelos Tatsis;
Amit Rai
- Funders
- ARD CVL Biopharmaceutical program of the Région Centre-Val de Loire
- Agence Nationale de la Recherche
- Horizon 2020
Research Article
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Evaluation of cytosine conversion methods for whole-genome DNA methylation profiling
[version 1; peer review: 2 not approved]
Peer Reviewers
Aaron John Stevens;
Sadaruddin Chachar
- Funders
- Arkansas State University
- Arkansas Biosciences Institute
Research Article
metrics
Revised
IL1B gene variants, but not TNF, CXCL8, IL6 and IL10, modify the course of cystic fibrosis in Polish patients.
[version 3; peer review: 1 approved, 2 approved with reservations]
Peer Reviewers
Tadeusz Przybyłowski;
Daniel J. Smith;
Agnieszka Swiatecka-Urban
- Funder
- Grant for young scientists from the Poznan Medical University
Genome Note
metrics
Inference of a genome-wide protein-coding gene set of the inshore hagfish Eptatretus burgeri
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Vincent Laudet;
Daniel Ocampo Daza
- Funders
- RIKEN Center for Biosystems Dynamics Research
- Japan Society for the Promotion of Science
- National Science Foundation
Brief Report
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Analysis by metagenomic next-generation sequencing of the lung virome during mechanical ventilation
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Allan Glanville;
Sophie Vallet
- Funder
- European Society of Intensive Care Medicine
Genome Note
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Identification of the exuviae of larva from Teinopalpus aureus Mell, 1923 using the complete mitochondrial genome
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Chang-Bae Kim;
Xue-yan Li
- Funder
- Zhejiang Normal University
Research Article
metrics
Revised
Genetic and environmental perturbations alter the rhythmic expression pattern of a circadian long non-coding RNA, Per2AS, in mouse liver
[version 2; peer review: 2 approved]
Peer Reviewers
Hikari Yoshitane;
Yao Cai
- Funder
- National Institute of General Medical Sciences
Data Note
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Crude oil hydrocarbons' effect on soil microbial metagenome from Niger Delta polluted soils
[version 1; peer review: 1 not approved]
Peer Reviewers
Raghavendran Sivasubramanian
Research Article
metrics
Revised
Characterizing gene expression in an in vitro biomechanical strain model of joint health
[version 2; peer review: 1 approved, 1 not approved]
Peer Reviewers
Alex Pollen and Jenelle Wallace;
Shireen Lamande
- Funders
- Achievement Rewards for College Scientists Foundation
- National Institutes of Health
Genome Note
metrics
The complete mitochondrial genome sequence of Chimarrogale leander (Insectivora: Soricidae)
[version 1; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers
Chaochao Hu;
Adrian Marciszak
- Funder
- Dabie Mountains Biodiversity Comprehensive Scientific Investigation project 3
Research Article
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HLA class I and discoveries of the HLA-K (pseudogene) related to disease severity and progression in patients with spondyloarthritis in Dr. Soetomo General Hospital, a tertiary health care center in Surabaya, Indonesia
[version 1; peer review: 1 approved, 1 not approved]
Peer Reviewers
Jose Antonio Pinto-Tasende;
James McCluskey
Review
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Understanding floral biology for CRISPR-based modification of color and fragrance in horticultural plants
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Muhammad Azam;
Albert Chern Sun Wong
Study Protocol
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The burden of BRCA1 and BRCA2 gene mutations among Vietnamese women and their associated factors: A protocol for a systematic review and meta-analysis
[version 1; peer review: 1 not approved]
Peer Reviewers
Weang Kee Ho and Boon Hong Ang
Software Tool Article
metrics
eXNVerify: coverage analysis for long and short-read sequencing data in clinical context
[version 1; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Zebin Zhang;
Xueyi Dong;
Wouter De Coster
- Funders
- Bergen Research Foundation
- Research Council of Norway
- Silesian University of Technology
Review
metrics
Revised
The genetic causes of male infertility: a Middle East and North Africa perspective
[version 2; peer review: 2 approved]
Peer Reviewers
Małgorzata Piasecka;
Arnold Peter Paul Achermann
- Funder
- Al Jalila Foundation
Genome Note
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The complete genome sequence of elite bread wheat cultivar, “Sonmez”
[version 1; peer review: 3 approved]
Peer Reviewers
Søren K. Rasmussen;
Zahide Neslihan Öztürk Gökçe;
Gabriel Doredo Perez
- Funder
- Budak Family Foundation (BFF)
Genome Note
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Genome of the lepidopleurid chiton Hanleya hanleyi (Mollusca, Polyplacophora)
[version 1; peer review: 2 approved]
Peer Reviewers
Vanessa L. Gonzalez;
Samuel Abalde
- Funders
- The Norwegian Biodiversity Information Centre
- National Science Foundation
Research Article
metrics
Associations among smoking, IDH mutations, MGMT promoter methylation, and grading in glioma: a cross-sectional study
[version 1; peer review: 1 approved with reservations, 1 not approved]
Peer Reviewers
I. Putu Eka Widyadharma;
Alberto Picca
- Funder
- PDUPT Grant from the Indonesian Ministry of Education, Culture, Research, and Technology
Genome Note
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PEER REVIEW DISCONTINUED
The complete genome sequences of Erythroxylum coca and Erythroxylum novogranatense
[version 1; peer review: peer review discontinued]
Peer Reviewers
Invited
- Funder
- IRIDIAN GENOMES
Genome Note
metrics
The complete mitochondrial genome sequencing of the Asian lesser white-toothed shrew (Crocidura shantungensis Miller, 1901; Eulipotyphla: Soricidae) from Jeju of Korea
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Rogelio Rosas-Valdez;
Sadık Demirtaş
- Funder
- National Research Foundation of Korea