All Research Articles

41-60 of 2,038 ARTICLES
https://doi.org/10.12688/f1000research.154762.1
Software Tool Article metrics
A high-throughput gene expression analysis software tool for developmental time series and gene signature analysis of human cardiomyocyte differentiation
[version 1; peer review: 2 approved with reservations]
Peer Reviewers Qing Liu; Stephanie Agioti and Apostolos Zaravinos
  • Funders
  • Indiana Academy of Science
  • Indiana State University Research Committee
  • National Institute on Minority Health and Health Disparities
PUBLISHED 26 Sep 2024
https://doi.org/10.12688/f1000research.133220.3
Data Note metrics
Revised
The identification of high-performing antibodies for FUS (Uniprot ID: P35637)  for use in western blot, immunoprecipitation, immunofluorescence and flow cytometry
[version 3; peer review: 2 approved]
Peer Reviewers Ryota Hikiami; Ralph H. Kehlenbach
  • Funders
  • Ontario Genomics
  • Canadian Institutes of Health Research Foundation
  • ALS Society of Canada
  • Institute for Precision Health and Leicester Drug Discovery and Diagnostics (LD3) via the MRC Impact Accelerator Account
  • ALS Association
  • Motor Neurone Disease Association
  • Genome Quebec
  • Mitacs
  • Genome Canda
LATEST VERSION PUBLISHED 24 Sep 2024
https://doi.org/10.12688/f1000research.72896.4
Research Article metrics
Revised
Prediction of the effects of the top 10 synonymous mutations from 26645 SARS-CoV-2 genomes of early pandemic phase
[version 4; peer review: 1 approved, 3 approved with reservations, 2 not approved]
Peer Reviewers Takahiko Koyama; Leyi Wang; Chandran Nithin; Roland Huber; Diego Forni; Tamar Schlick
  • Funder
  • Multimedia University, Malaysia IRFund 2.0
LATEST VERSION PUBLISHED 18 Sep 2024
https://doi.org/10.12688/f1000research.140344.2
Research Article metrics
Revised
NCBench: providing an open, reproducible, transparent, adaptable, and continuous benchmark approach for DNA-sequencing-based variant calling
[version 2; peer review: 2 approved]
Peer Reviewers Justin M. Zook; Kez Cleal
  • Funders
  • German Federal Ministry for Education and Research
  • Deutsche Forschungsgemeinschaft
LATEST VERSION PUBLISHED 12 Sep 2024
https://doi.org/10.12688/f1000research.150924.1
Research Article metrics
Detection of yellow mosaic virus resistance in Soybean (Glycine max L.) genotypes for yield and related traits
[version 1; peer review: 3 approved with reservations, 1 not approved]
Peer Reviewers Karupiah Eraivan Arutkani Aiyanathan; Gabriel Madoglio Favara; Wanwisa Siriwan; Shridhar Hiremath
PUBLISHED 30 Aug 2024
https://doi.org/10.12688/f1000research.131134.2
Research Article metrics
Revised
Improving genomic prediction of rhizomania resistance in sugar beet (Beta vulgaris L.) by implementing epistatic effects and feature selection
[version 2; peer review: 1 approved with reservations, 3 not approved]
Peer Reviewers J Mitchell McGrath; Muhammad Massub Tehseen; Daniela Holtgräwe; Chenggen Chu
LATEST VERSION PUBLISHED 28 Aug 2024
https://doi.org/10.12688/f1000research.152392.2
Research Article metrics
Revised
Unraveling the genetic basis of antibiotic resistance in Staphylococcus aureus: Focus on mecA and PVL Genes
[version 2; peer review: 2 approved with reservations]
Peer Reviewers Heather B. Miller; Xiancai Rao
LATEST VERSION PUBLISHED 27 Aug 2024
https://doi.org/10.12688/f1000research.153922.1
Research Article metrics
Analysis of inbreeding depression in five S1 Cassava families of elite varieties at the seedling nursery and clonal evaluation trial stages.
[version 1; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers Charles Orek; Karoline Leonard Sichalwe
  • Funders
  • National Root Crops Research Institute, Umudike, Abia State, Nigeria
  • Generation Challenge Programme
PUBLISHED 27 Aug 2024
https://doi.org/10.12688/f1000research.75952.2
Research Article metrics
Revised
A Comparison of Pain Before and After Transfusion in Adult transfusion-dependent thalassemia (TDT) Using BPI-SF
[version 2; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers Xuemei Zhen; Noor Syahireen Mohammed; Donna Wall
  • Funder
  • This research was funded by Competitive Internal Research Grant Universitas Padjadjaran (Academic Leadership Grant).
LATEST VERSION PUBLISHED 09 Aug 2024
https://doi.org/10.12688/f1000research.150836.2
Genome Note metrics
Revised
The genomes of the aquarium sponges Tethya wilhelma and Tethya minuta (Porifera: Demospongiae)
[version 2; peer review: 2 approved]
Peer Reviewers Bernie Degnan; Eric Bautista-Guerrero
  • Funders
  • Deutsche Forschungsgemeinschaft
  • Villum Fonden
  • H2020 Marie Skłodowska-Curie Actions
  • LMUexcellent
LATEST VERSION PUBLISHED 01 Aug 2024
https://doi.org/10.12688/f1000research.149793.2
Brief Report metrics
Revised
Genome assembly catalog for species in the Japanese Red List: unlocking endangered biodiversity through genomic inventory
[version 2; peer review: 2 approved]
Peer Reviewers James Fleming; Guilherme Borba Neumann
  • Funder
  • “Strategic Research Projects” grant from ROIS (Research Organization of Information and Systems) to Shigehiro Kuraku
LATEST VERSION PUBLISHED 22 Jul 2024
https://doi.org/10.12688/f1000research.139356.2
Research Article metrics
Revised
Scoutknife: A naïve, whole genome informed phylogenetic robusticity metric
[version 2; peer review: 3 approved]
Peer Reviewers Paul Zaharias; Xianzhao Kan; Anthony K. Redmond
  • Funders
  • Norges Forskningsråd
  • Norwegian Metacenter for Computational Science
LATEST VERSION PUBLISHED 10 Jul 2024
https://doi.org/10.12688/f1000research.73115.2
Method Article metrics
Revised
Skin swabbing protocol to collect DNA samples from small-bodied fish species
[version 2; peer review: 2 approved]
Peer Reviewers Luigi Margiotta-Casaluci; Errol Cason
  • Funder
  • National Centre for the Replacement Refinement and Reduction of Animals in Research
LATEST VERSION PUBLISHED 27 Jun 2024
https://doi.org/10.12688/f1000research.126044.3
Research Article metrics
Revised
Cloning and characterization of the LvCTL genes encoding C-type lectin from white-leg shrimp (Litopenaeus vannamei)
[version 3; peer review: 2 approved, 2 approved with reservations]
Peer Reviewers Hieu Tran-Van; Mengqiang Wang; Ta-Hui Lin; Parin Chaivisuthangkura
  • Funders
  • Vietnam program of National Gene Fund
  • National Foundation for Science and Technology Development
LATEST VERSION PUBLISHED 17 Jun 2024
https://doi.org/10.12688/f1000research.54195.4
Research Article metrics
Revised
Screening for antifolate and artemisinin resistance in Plasmodium falciparum dried-blood spots from three hospitals of Eritrea
[version 4; peer review: 2 approved]
Peer Reviewers Olusola Ojurongbe; Sam L Nsobya
  • Funders
  • Japan International Cooperation Agency (JICA) – Eritrea
  • Association of African Universities (AAU)
LATEST VERSION PUBLISHED 12 Jun 2024
https://doi.org/10.12688/f1000research.148473.1
Genome Note metrics
The first complete mitochondrional genome of Anopheles gibbinsi using a skimming sequencing approach.
[version 1; peer review: 3 approved]
Peer Reviewers Nicola Zadra; Luke Ambrose; Alexey Makunin
  • Funders
  • Johns Hopkins Malaria Research Institute
  • NIH T32 Training Grant
  • NSF-Accelerator Project D-688: Computing the Biome
  • NIH Southern and Central Africa International Centers of Excellence for Malaria Research
PUBLISHED 30 May 2024
https://doi.org/10.12688/f1000research.130043.3
Research Article metrics
Revised
The identification of retro-DNAs in primate genomes as DNA transposons mobilizing via retrotransposition
[version 3; peer review: 2 approved]
Peer Reviewers Rene Massimiliano Marsano; Shengjun Tan
  • Funders
  • Natural Sciences and Engineering Research Council of Canada
  • Ontario Research Foundation
  • Canada Foundation for Innovation
  • Canada Research Chairs
LATEST VERSION PUBLISHED 29 May 2024
https://doi.org/10.12688/f1000research.134798.2
Software Tool Article metrics
Revised
Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT
[version 2; peer review: 1 approved, 3 approved with reservations]
Peer Reviewers Timothy Read and Robert Petit III; Jonas Coelho Kasmanas; Intikhab Alam; Emma Griffiths
  • Funders
  • Max Planck-Harvard Research Center for the Archaeoscience of the Ancient Mediterranean
  • Carlsbergfondet
  • H2020 European Research Council
  • Nederlandse Organisatie voor Wetenschappelijk Onderzoek
  • Knut och Alice Wallenbergs Stiftelse
  • National Institutes of Health
  • Carl Tryggers Stiftelse för Vetenskaplig Forskning
  • Deutsche Forschungsgemeinschaft
  • Friedrich-Schiller-Universität Jena
  • Science for Life Laboratory National Sequencing Projects
  • Werner Siemens-Stiftung
  • Max-Planck-Gesellschaft
  • National Science Foundation
  • Leverhulme Trust
  • Svenska Forskningsrådet Formas
  • Science Foundation Ireland-Irish Research Council
  • Science Foundation Ireland Centre for Research Training in Genomics Data Science
  • Università degli Studi di Padova
  • Institut Pasteur
  • H2020 Marie Skłodowska-Curie Actions
LATEST VERSION PUBLISHED 28 May 2024
https://doi.org/10.12688/f1000research.145486.1
Research Article metrics
Negligible effects of read trimming on the accuracy of germline short variant calling in the human genome
[version 1; peer review: 2 approved with reservations]
Peer Reviewers Dharma Varapula; Xihao Li and Muqing Zhou
PUBLISHED 17 May 2024
https://doi.org/10.12688/f1000research.53858.2
Software Tool Article metrics
Revised
GARCOM: A user-friendly R package for genetic mutation counts
[version 2; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers Ettore Mosca; Stephen M. Pederson; Tao Wang
  • Funder
  • National Institute of Aging
LATEST VERSION PUBLISHED 17 May 2024
41-60 of 2,038 ARTICLES
Articles
We publish a wide range of article types in science, engineering, medicine, social sciences and humanities, with no editorial biases.
Sign In
If you've forgotten your password, please enter your email address below and we'll send you instructions on how to reset your password.

The email address should be the one you originally registered with F1000.

Email address not valid, please try again

You registered with F1000 via Google, so we cannot reset your password.

To sign in, please click here.

If you still need help with your Google account password, please click here.

You registered with F1000 via Facebook, so we cannot reset your password.

To sign in, please click here.

If you still need help with your Facebook account password, please click here.

Code not correct, please try again
Email us for further assistance.
Server error, please try again.