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 in 
https://doi.org/10.12688/f1000research.127990.2
Genome Note metrics
Revised
Draft genome sequences of three emerging beta-lactamase-producing Escherichia coli in the camel production system in Northern Kenya
[version 2; peer review: 2 approved]
Rachael Gachogo, Irene Karegi, Brian Ogoti, Victor Musyoki, Dino Martins, Frank Onyambu, Joseph Kamau
Peer Reviewers Meenakshi S. Iyer; Janet Midega
LATEST VERSION PUBLISHED 16 May 2023
https://doi.org/10.12688/f1000research.133270.1
Brief Report metrics
High copy number of multi-drug resistance genes in spent coffee grounds used in organic composting
[version 1; peer review: 1 approved with reservations]
Jinpao Hou, Yuen Ting Chiu, Kit-ling Lam, Ki-ying Kwong, Johnny Hoi-lung Lau, Lawal M. Marafa, Stephen Kwok-wing Tsui, Ian Wing-yin Mo, Ping Lung Chan
Peer Reviewers Tam Tran
  • Funders
  • Hong Kong Metropolitan University
  • Research Grants Council of the Hong Kong Special Administrative Region
PUBLISHED 11 May 2023
https://doi.org/10.12688/f1000research.111995.3
Systematic Review metrics
Revised
The role of genetic factors in microtia: A systematic review
[version 3; peer review: 2 approved with reservations, 1 not approved]
Indri Lakhsmi Putri, Alexandria Stephanie, Rachmaniar Pramanasari, Moshe Kon, Citrawati Dyah Kencono Wungu
Peer Reviewers Walid D. Fakhouri; Isabella Monlleó; Miriam Erandi Reyna-Fabian
LATEST VERSION PUBLISHED 26 Apr 2023
https://doi.org/10.12688/f1000research.53997.2
Research Article metrics
Revised
Comparison of cell size, chlorophyll fluorescence and cadmium (Cd2+) bioaccumulation between wild-type and mutant strains of Chlamydomonas reinhardtii upon exposure to Cd2+
[version 2; peer review: 4 approved with reservations]
Ruby Ynalvez, Hector Gonzalez-Cantu, Erick Vazquez-Cano
Peer Reviewers Jiangxin Wang; Stefan Schmollinger; Beatrycze Nowicka; Chonghua Li
  • Funders
  • Texas Higher Education Coordinating Board (THECB) - Norman Hackerman Advanced Research Program
  • Office of Grants and Sponsored Research, Texas A&M International University
LATEST VERSION PUBLISHED 25 Apr 2023
https://doi.org/10.12688/f1000research.129929.2
Research Article metrics
Revised
Disease association and comparative genomics of compositional bias in human proteins
[version 2; peer review: 2 approved]
Christos E. Kouros, Vasiliki Makri, Christos A. Ouzounis, Anastasia Chasapi
Peer Reviewers Stella Tamana; Gregory Amoutzias
  • Funders
  • European Social Fund
  • European Regional Development Fund
LATEST VERSION PUBLISHED 14 Apr 2023
https://doi.org/10.12688/f1000research.76218.2
Review metrics
Revised
Polygenic Risk Score in African populations: progress and challenges
[version 2; peer review: 2 approved]
Yagoub Adam, Suraju Sadeeq, Judit Kumuthini, Olabode Ajayi, Gordon Wells, Rotimi Solomon, Olubanke Ogunlana, Emmanuel Adetiba, Emeka Iweala, Benedikt Brors, Ezekiel Adebiyi
Peer Reviewers Bingxin Zhao; Cathryn M. Lewis and Michelle Kamp
  • Funders
  • World Bank
  • National Human Genome Research Institute
LATEST VERSION PUBLISHED 11 Apr 2023
https://doi.org/10.12688/f1000research.109628.2
Case Report metrics
Revised
Case Report: Identification of likely recurrent CEP290 mutation in a child with Joubert syndrome and cerebello-retinal-renal features.
[version 2; peer review: 2 approved]
Lidvana Spahiu, John A Sayer, Emir Behluli, Thomas Liehr, Gazmend Temaj
Peer Reviewers Muhammad Ansar; Karen I. Lange
  • Funders
  • Kidney Research UK
  • Northern Counties Kidney Research Fund
LATEST VERSION PUBLISHED 31 Mar 2023
https://doi.org/10.12688/f1000research.130734.1
Genome Note metrics
The first genome sequence of Anopheles squamous from Macha, Zambia
[version 1; peer review: 2 approved]
Valerie T. Nguyen, Travis C. Collier, Sangwoo Seok, Xiaodi Wang, Monicah M. Mburu, Limonty Simubali, Mary E. Gebhardt, Douglas E. Norris, Yoosook Lee
Peer Reviewers Megan A. Riddin; Tara Roth
  • Funders
  • Department of Entomology and Nematology, University of Florida
  • University of Florida
  • Johns Hopkins Malaria Research Institute, Johns Hopkins Bloomberg School of Public Health
  • National Institutes of Health
  • College of Agricultural and Life Sciences, University of Florida
  • Bloomberg Philanthropies
PUBLISHED 24 Mar 2023
https://doi.org/10.12688/f1000research.131637.1
Genome Note metrics
The complete genome sequences of Penicillium concavorugulosum
[version 1; peer review: 1 not approved]
Khosi Ramachela, Galaletsang Segone
Peer Reviewers Anthony A. Adegoke
PUBLISHED 23 Mar 2023
https://doi.org/10.12688/f1000research.130888.1
Research Article metrics
Network biology of lapatinib resistance in different types of HER2-positive breast cancers informs the prioritization of the combination anticancer treatments as anti-resistance interventions
[version 1; peer review: 1 approved with reservations]
Bayan Alkhawaja, Anas Khaleel, Wael Abu Dayyih, Mohammed F. Hamad, Rima Hajjo, Mohammad Hailat
Peer Reviewers Wenjing Liu
PUBLISHED 09 Mar 2023
https://doi.org/10.12688/f1000research.127469.2
Brief Report metrics
Revised
The number of neutral mutants in an expanding Luria-Delbrück population is approximately Fréchet
[version 2; peer review: 2 approved]
Steven A. Frank
Peer Reviewers Qi Zheng; Pavol Bokes
  • Funders
  • U.S. Department of Defense
  • National Science Foundation
  • Donald Bren Foundation
LATEST VERSION PUBLISHED 03 Mar 2023
https://doi.org/10.12688/f1000research.18656.3
Data Note metrics
Revised
On the design of linked datasets mapping networks of collaboration in the genomic sequencing of Saccharomyces cerevisiae, Homo sapiens, and Sus scrofa
[version 3; peer review: 2 approved]
Mark Wong, Rhodri Leng
Peer Reviewers Rachel Ankeny; Jake Lever
  • Funder
  • European Research Council
LATEST VERSION PUBLISHED 28 Feb 2023
https://doi.org/10.12688/f1000research.109136.2
Research Article metrics
Revised
Genomic profiles of Indonesian colorectal cancer patients
[version 2; peer review: 2 approved]
Murdani Abdullah, Sofy Meilany, Hidayat Trimarsanto, Safarina G. Malik, Ninik Sukartini, Firhat Idrus, Saskia A. Nursyirwan, Virly N. Muzellina, Rabbinu R. Pribadi, Amanda P. Utari, Hasan Maulahela, Ari F. Syam
Peer Reviewers Ahmad Rusdan Handoyo Utomo; Wei Zhang
  • Funder
  • Indonesian Ministry of Research, Technology, and Higher Education through the World Class Research (WCR) 2019 Program
LATEST VERSION PUBLISHED 21 Feb 2023
https://doi.org/10.12688/f1000research.130615.1
Research Article metrics
Genome-wide comparisons reveal broad variations in intraspecific SNP frequencies among species in Agaricomycetes, Basidiomycota
[version 1; peer review: 1 approved]
Kuan Zhao, Jianping Xu
Peer Reviewers Alexandra Dallaire
  • Funders
  • Natural Science Foundation of Jiangxi Province, China
  • Natural Sciences and Engineering Research Council of Canada
  • National Natural Science Foundation of China
PUBLISHED 20 Feb 2023
https://doi.org/10.12688/f1000research.129413.1
Genome Note metrics
The complete mitochondrial genome of the hybrid snow crab Chionoecetes opilio (♀) × C. japonicus (♂) (Crustacea: Decapoda: Majoidea) and its phylogenetic analysis
[version 1; peer review: 1 approved, 1 approved with reservations]
Bong Han Yun, Yong Hwi Kim, Ho-Seop Han, Hye Jin Kim, Jong Yeon Park, In-Chul Bang
Peer Reviewers Jongwoo Jung; Christopher M Austin
  • Funders
  • Soonchunhyang University
  • Ministry of Oceans and Fisheries
PUBLISHED 20 Feb 2023
https://doi.org/10.12688/f1000research.26464.2
Research Article metrics
Revised
First report on molecular identification of Fusarium species causing fruit rot of mandarin (Citrus reticulata) in Bangladesh
[version 2; peer review: 2 approved]
Mohammed Faruk Hasan, Mohammed Asadul Islam, Biswanath Sikdar
Peer Reviewers Shuvra Kanti Dey; Barbara Sawicka
  • Funder
  • Ministry of Science and Technology, Government of the People’s Republic of Bangladesh
LATEST VERSION PUBLISHED 15 Feb 2023
https://doi.org/10.12688/f1000research.126840.2
Software Tool Article metrics
Revised
Gene expression data visualization tool on the o²S²PARC platform
[version 2; peer review: 2 approved]
Hiba Ben Aribi, Mengyuan Ding, Anmol Kiran
Peer Reviewers Joost B. M. Wagenaar; Esra Neufeld
LATEST VERSION PUBLISHED 06 Feb 2023
https://doi.org/10.12688/f1000research.126829.1
Systematic Review metrics
Genome-wide association studies (GWAS) for orthopedic diseases: a systematic review
[version 1; peer review: 1 approved with reservations, 1 not approved]
Mir Sadat-Ali
Peer Reviewers Mehdi Momen; Serra Kaya
PUBLISHED 30 Jan 2023
https://doi.org/10.12688/f1000research.128621.1
Research Article metrics
Sepsis decreases lung SVEP1 expression in a murine model
[version 1; peer review: 1 approved with reservations, 2 not approved]
Takeo Kurita, Takehiko Oami, Lisa Fujimura, Akemi Sakamoto, Ryoko Sato-Nishiuchi, Kiyotoshi Sekiguchi, Masahiko Hatano, Taka-aki Nakada
Peer Reviewers Jared S Elenbaas and Ved Patel; Gavin E Morris; Thorsten Kessler
  • Funder
  • Grants-in-Aid for Scientific Research from the Japan Society for the Promotion of Science.
PUBLISHED 19 Jan 2023
https://doi.org/10.12688/f1000research.122437.2
Research Article metrics
Revised
Genomic prediction in plants: opportunities for ensemble machine learning based approaches
[version 2; peer review: 1 approved, 2 approved with reservations]
Muhammad Farooq, Aalt D.J. van Dijk, Harm Nijveen, Shahid Mansoor, Dick de Ridder
Peer Reviewers Muhammad Tehseen Azhar; Miguel Pérez-Enciso; Yongkang Kim
  • Funder
  • Wageningen University and Research
LATEST VERSION PUBLISHED 10 Jan 2023
101-120 of 2,038 ARTICLES
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