Cell & Molecular Biology

Cell & Molecular Biology

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https://doi.org/10.12688/f1000research.175368.1
Opinion Article metrics AWAITING PEER REVIEW
From Sponge to Scaffold: Re-centering lncRNAs in Epi- genetic Regulation
[version 1; peer review: awaiting peer review]
Anatoliy V Zubritskiy, Yulia A. Medvedeva
Peer Reviewers Invited
  • Funder
  • Russian Science Foundation
PUBLISHED 27 Jan 2026
https://doi.org/10.12688/f1000research.173746.1
Research Article metrics
Effect of Small Nuclear RNA 64 (SNORA64) on Apoptosis Regulator Genes in Pancreatic Cancer in Vitro
[version 1; peer review: 1 approved with reservations]
Rana Alfardan
Peer Reviewers Adeolu Oluremi
  • Funder
  • This work was partially supported by Southern Technical University under scientific research awards
PUBLISHED 16 Jan 2026
https://doi.org/10.12688/f1000research.164583.2
Software Tool Article metrics
Revised
Assembly and quantification of transcripts from noisy long reads with NIFFLR
[version 2; peer review: 1 approved with reservations, 2 not approved]
Alina Guo, Mihaela Pertea, Aleksey V Zimin
Peer Reviewers Colin Dewey; Fairlie Reese; Yuan Gao
  • Funders
  • Directorate for Biological Sciences
  • NIH
LATEST VERSION PUBLISHED 03 Dec 2025
https://doi.org/10.12688/f1000research.168556.1
Research Article metrics
Single-cell RNA sequencing of cerebrospinal fluid reveals the expansion of innate lymphoid cells with upregulated transposable elements in multiple sclerosis
[version 1; peer review: 2 not approved]
Pouria Mosaddeghi, Mitra Farahmandnejad, Mohammad M. Zarshenas
Peer Reviewers Raquel Garza; Patricia A. Thibault
  • Funder
  • Shiraz University of Medical Sciences
PUBLISHED 10 Oct 2025
https://doi.org/10.12688/f1000research.168181.1
Research Article metrics AWAITING PEER REVIEW
Variations in ADAR editing of nonsense-mediated decay targets in PD males and females
[version 1; peer review: awaiting peer review]
Heather Mercer, Aiswarya Mukundan Nair, Ayesha Tariq, Helen Piontkivska
Peer Reviewers Invited
  • Funders
  • The Brain Health Institute and the Healthy Communities Research Institute of Kent State University
  • The David J. Mlynar Fund for Research on Huntington's Disease
PUBLISHED 29 Sep 2025
https://doi.org/10.12688/f1000research.163843.1
Research Article metrics
Differences between human male and female neutrophils with respect to which RNAs are present in polysomes
[version 1; peer review: 1 not approved]
Darrell Pilling, Kristen M. Consalvo, Sara A. Kirolos, Richard H. Gomer
Peer Reviewers Sebastian Korste
  • Funder
  • National Institutes of Health
PUBLISHED 30 May 2025
https://doi.org/10.12688/f1000research.130430.3
Data Note metrics
Revised
Cigarette smoke alters circRNA expression in human T-cells
[version 3; peer review: 1 approved, 2 approved with reservations]
So Jin Hong, Zhaohao Liao, Kenneth W. Witwer, Ashley E. Russell
Peer Reviewers Thivanka Muthumalage; Zahraa Rahal; Meity Ardiana
  • Funder
  • National Institute on Drug Abuse
LATEST VERSION PUBLISHED 09 Apr 2025
https://doi.org/10.12688/f1000research.152034.2
Research Article metrics
Revised
RNA-sequencing Reveals Altered Gene Expression in the Ventromedial Hypothalamus Following Predator Odor Exposure
[version 2; peer review: 1 approved, 2 approved with reservations]
Ashely Shemery, Megan Gibson, Erin Gorrell, Diamond Daniel, Helen Piontkivska, Colleen M Novak
Peer Reviewers Yunhui Liu; Vito S Hernandez; Li Li and Yanan Wu
  • Funder
  • National Institute of Diabetes and Digestive and Kidney Diseases
LATEST VERSION PUBLISHED 05 Mar 2025
https://doi.org/10.12688/f1000research.151350.2
Systematic Review metrics
Revised
Diagnostic and Prognostic Values of miRNAs in High-Grade Gliomas: A Systematic Review
[version 2; peer review: 2 approved]
Renindra Ananda Aman, Mohammad Galih Pratama, Ricky Rusydi Satriawan, Irfani Ryan Ardiansyah, I Ketut Agus Suanjaya
Peer Reviewers Dessika Rahmawati; Abel Po-Hao Huang
LATEST VERSION PUBLISHED 15 Jan 2025
https://doi.org/10.12688/f1000research.74416.2
Software Tool Article metrics
Revised
BASiCS workflow: a step-by-step analysis of expression variability using single cell RNA sequencing data
[version 2; peer review: 1 approved, 2 approved with reservations]
Alan O'Callaghan, Nils Eling, John C. Marioni, Catalina A. Vallejos
Peer Reviewers Oliver M. Crook; Andrew McDavid; Michel S Naslavsky
  • Funders
  • Cancer Research UK
  • University of Edinburgh
  • European Molecular Biology Laboratory
LATEST VERSION PUBLISHED 07 May 2024
https://doi.org/10.12688/f1000research.144077.1
Study Protocol metrics
VDR mRNA Expression And Serum Vitamin D Levels in Post-Covid Vaccinated Patients
[version 1; peer review: 1 approved, 1 approved with reservations]
Sandesh Shende, Jaishriram Rathored
Peer Reviewers Gaurav Kaushik; Olga Adriana Caliman-Sturdza
PUBLISHED 23 Apr 2024
https://doi.org/10.12688/f1000research.125945.2
Review metrics
Revised
Pathomechanisms Of Non-Coding RNAs, Hub Genes, and Lifestyle Related To The Oxidative Stress In Type 2 Diabetes And Cardiac Complications.
[version 2; peer review: 1 approved, 1 not approved]
Fatemeh Hajibabaie, Faranak Aali, Navid Abedpoor
Peer Reviewers Gladys Ko; Yi Song
LATEST VERSION PUBLISHED 13 Sep 2023
https://doi.org/10.12688/f1000research.130316.1
Research Article metrics
Impact of estrogen and progesterone hormone receptors on the progression of interferon-γ sensitized breast cancer cells
[version 1; peer review: 1 approved, 1 approved with reservations, 1 not approved]
Israa Shihab, Amal Bouzid, Burcu Yener, Alaa Altaie, Poorna Manasa Bhamidimarri, Mouza Al Ameri, Riyad Bendardaf, Mawieh Hamad, Rifat Hamoudi
Peer Reviewers Aamir Ahmed; Wenbin Zhou; Claudia Lanari and Andrés Elia
  • Funders
  • Al-Jalila Foundation
  • ASPIRE Precision Medicine Research Institute Abu Dhabi
PUBLISHED 08 Sep 2023
https://doi.org/10.12688/f1000research.128320.3
Research Article metrics
Revised
Concatenated 16S rRNA sequence analysis improves bacterial taxonomy
[version 3; peer review: 2 approved]
Bobby Paul
Peer Reviewers Siddaramappa Shivakumara; Wellyzar Sjamsuridzal
  • Funder
  • Manipal Academy of Higher Education
LATEST VERSION PUBLISHED 01 Sep 2023
https://doi.org/10.12688/f1000research.125351.2
Research Article metrics
Revised
Circadian clock control of tRNA synthetases in Neurospora crassa
[version 2; peer review: 2 approved]
Kathrina D. Castillo, Emily D. Chapa, Teresa M. Lamb, Madhusree Gangopadhyay, Deborah Bell-Pedersen
Peer Reviewers Ruifeng Cao; Luis F. Larrondo
  • Funders
  • National Institute of General Medical Sciences
  • Arnold and Mabel Beckman Foundation
LATEST VERSION PUBLISHED 17 Aug 2023
https://doi.org/10.12688/f1000research.131861.2
Research Article metrics
Revised
Single-cell transcriptional uncertainty landscape of cell differentiation
[version 2; peer review: 2 approved]
Nan Papili Gao, Olivier Gandrillon, András Páldi, Ulysse Herbach, Rudiyanto Gunawan
Peer Reviewers Alessandro Giuliani; Geneviève Dupont
  • Funders
  • Swiss National Science Foundation
  • Agence Nationale de la Recherche
LATEST VERSION PUBLISHED 20 Jul 2023
https://doi.org/10.12688/f1000research.128716.2
Review metrics
Revised
Circadian clocks in health and disease: Dissecting the roles of the biological pacemaker in cancer
[version 2; peer review: 2 approved]
Bridget M. Fortin, Alisa L. Mahieu, Rachel C. Fellows, Nicholas R. Pannunzio, Selma Masri
Peer Reviewers Phillip Karpowicz; Kristin Eckel-Mahan
  • Funders
  • American Cancer Society
  • National Institutes of Health
  • Johnson and Johnson
  • V Foundation for Cancer Research
LATEST VERSION PUBLISHED 16 May 2023
https://doi.org/10.12688/f1000research.132670.1
Research Article metrics
Evaluation of serum complement C4 among COVID-19 patients in Khartoum state: a case control-based study
[version 1; peer review: 2 approved, 1 approved with reservations]
Mohammed Yahya, Yousif Ali Rahamtalla, Nasr Mohammed Nasr, Babbiker Mohammed Taher Gorish
Peer Reviewers Adnan Mezher Maysam; Marwa Hameed Alkhafaji; Andang Miatmoko
PUBLISHED 21 Apr 2023
https://doi.org/10.12688/f1000research.125579.1
Research Article metrics
Cell-type classification of cancer single-cell RNA-seq data using the Subsemble ensemble-based machine learning classifier
[version 1; peer review: 3 approved with reservations]
David Chen, Parisa Shooshtari
Peer Reviewers Saskia Freytag; Yue Cao; Zhixiang Ren
  • Funders
  • Children's Health Research Institute
  • Ontario Institute for Cancer Research
  • Natural Sciences and Engineering Research Council of Canada
  • NSERC Undergraduate Student Research Award
PUBLISHED 14 Apr 2023
https://doi.org/10.12688/f1000research.128537.1
Research Article metrics
Association between mutant E6 and E7 Human Papilloma Virus Type 16 oncogenes with cyclin D1 expression in cervical cancer: Observational study in Bali
[version 1; peer review: 1 approved with reservations, 2 not approved]
I Nyoman Bayu Mahendra, I Nyoman Gede Budiana, I Gede Mega Putra, Anom Suardika, Anak Agung Gede Putra Wiradnyana, Alisza Novrita Sari
Peer Reviewers Jacyara Macedo; Eric Siegel; Atar Singh Kushwah
PUBLISHED 09 Mar 2023
1-20 of 41 ARTICLES
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