Cell & Molecular Biology

Cell & Molecular Biology

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201-220 of 279 ARTICLES
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 in 
https://doi.org/10.12688/f1000research.109895.4
Research Article metrics
Revised
Duration of dry and humidified incubation of single-step embryo culture medium and oxygen tension during sham culture do not alter medium composition.
[version 4; peer review: 2 approved]
Aswathi Cheredath, Shubhashree Uppangala, Gitanjali Asampille, Vani Lakshmi R., David Joseph, Keyur Raval, Nagana Gowda G. A., Guruprasad Kalthur, Satish Kumar Adiga
Peer Reviewers Erode N. Prabhakaran; Borut Kovačič and Peter Slatinšek
  • Funders
  • Science and Engineering Research Board
  • Manipal Academy of Higher Education
LATEST VERSION PUBLISHED 30 May 2022
https://doi.org/10.12688/f1000research.113307.1
Research Article metrics
The role of endothelial microparticles in children with asthma: Does it promote atherosclerosis progress?
[version 1; peer review: 2 not approved]
Lisa Adhia Garina, Bambang Supriyatno, Faisal Yunus, Ina Susianti Timan, Bambang Hermani, Aria Kekalih, Cissy B. Kartasasmita, Suhendro Suwarto
Peer Reviewers Susetta Finotto; Sy Duong-Quy
  • Funder
  • This study was supported by Beasiswa Unggulan Dosen Indonesia (BUDI-LPDP) from The Ministry of Finance and Ministry of Education, Culture, Study and Technology, The Indonesian Government
PUBLISHED 20 May 2022
https://doi.org/10.12688/f1000research.72904.2
Research Article metrics
Revised
Prediction of the effects of the top 10 nonsynonymous variants from 30229 SARS-CoV-2 strains on their proteins
[version 2; peer review: 2 approved]
Boon Zhan Sia, Wan Xin Boon, Yoke Yee Yap, Shalini Kumar, Chong Han Ng
Peer Reviewers Ujwal Ranjit Bagal and Vishal Nayak; In-Hee Lee
  • Funder
  • Multimedia University
LATEST VERSION PUBLISHED 18 May 2022
https://doi.org/10.12688/f1000research.53595.3
Research Article metrics
Revised
Andrographolide, isolated from Andrographis paniculata, induces apoptosis in monocytic leukemia and multiple myeloma cells via augmentation of reactive oxygen species production
[version 3; peer review: 2 approved]
Hiroki Doi, Taei Matsui, Johannes M. Dijkstra, Atsushi Ogasawara, Yuki Higashimoto, Seiji Imamura, Tamae Ohye, Hiromu Takematsu, Itsuro Katsuda, Hidehiko Akiyama
Peer Reviewers Christian Bailly; Leonardo Pereira Franchi
LATEST VERSION PUBLISHED 29 Apr 2022
https://doi.org/10.12688/f1000research.53737.2
Research Article metrics
Revised
Silencing of Carboxypeptidase E expression inhibits proliferation and invasion of Panc-1 pancreatic cancer cells
[version 2; peer review: 2 approved]
Hong Lou, Y Peng Loh
Peer Reviewers Vinayak C. Palve; Lata Singh
  • Funder
  • Eunice Kennedy Shriver National Institute of Child Health and Human Development
LATEST VERSION PUBLISHED 28 Apr 2022
https://doi.org/10.12688/f1000research.111159.1
Review metrics
Molecular mediators involved in skin healing: a narrative review
[version 1; peer review: 1 approved with reservations]
Camila dos Santos Leite, Oscar César Pires, Pedro Henrique Avi, Maria Luiza M. Soto, Ariane Ribeiro Martins, Thalita Rocha
Peer Reviewers David Leavesley
PUBLISHED 27 Apr 2022
https://doi.org/10.12688/f1000research.51018.2
Brief Report metrics
Revised
Overlap of vitamin A and vitamin D target genes with CAKUT-related processes
[version 2; peer review: 2 approved, 2 approved with reservations]
Ozan Ozisik, Friederike Ehrhart, Chris T. Evelo, Alberto Mantovani, Anaı̈s Baudot
Peer Reviewers Elena Menegola; Matias Simons; Olivia Angelin-Bonnet; Sean Eddy
  • Funders
  • Horizon 2020
  • The Excellence Initiative of Aix-Marseille University - A*Midex
LATEST VERSION PUBLISHED 21 Apr 2022
https://doi.org/10.12688/f1000research.110936.1
Research Article metrics
TReNCo: Topologically associating domain (TAD) aware regulatory network construction
[version 1; peer review: 2 not approved]
Christopher Bennett, Viren Amin, Daehwan Kim, Murat Can Cobanoglu, Venkat Malladi
Peer Reviewers Junbai Wang; Sonika Tyagi
  • Funders
  • National Institute of General Medical Sciences
  • Cancer Prevention and Research Institute of Texas
PUBLISHED 14 Apr 2022
https://doi.org/10.12688/f1000research.76154.1
Software Tool Article metrics
IsoAligner: dynamic mapping of amino acid positions across protein isoforms
[version 1; peer review: 2 approved with reservations]
Jacob Hanimann, Holger Moch, Martin Zoche, Abdullah Kahraman
Peer Reviewers James D Stephenson; Laurens van de Wiel
PUBLISHED 31 Mar 2022
https://doi.org/10.12688/f1000research.76191.2
Research Article metrics
Revised
Sulfiredoxin-1 blood mRNA expression levels negatively correlate with hippocampal atrophy and cognitive decline
[version 2; peer review: 2 approved]
Catalina Anca Cucos, Ioana Cracana, Maria Dobre, Bogdan Ovidiu Popescu, Catalina Tudose, Luiza Spiru, Gina Manda, Gabriela Niculescu, Elena Milanesi
Peer Reviewers David Gurwitz; Sermin Genc
  • Funder
  • Competitiveness Operational Programme
LATEST VERSION PUBLISHED 21 Mar 2022
https://doi.org/10.12688/f1000research.75677.1
Research Article metrics
Design-of-experiments in vitro transcription yield optimization of self-amplifying RNA
[version 1; peer review: 2 approved with reservations]
Karnyart Samnuan, Anna K Blakney, Paul F McKay, Robin J Shattock
Peer Reviewers Rok Sekirnik; Emily Voigt and Devin Brandt
  • Funders
  • European Commission H2020
  • Engineering and Physical Sciences Research Council
PUBLISHED 18 Mar 2022
https://doi.org/10.12688/f1000research.108829.1
Method Article metrics
Efficient embryoid-based method to improve generation of optic vesicles from human induced pluripotent stem cells
[version 1; peer review: 2 approved]
Jonathan Eintracht, Philippa Harding, Dulce Lima Cunha, Mariya Moosajee
Peer Reviewers Magdalene J. Seiler; J. Arjuna Ratnayaka
  • Funders
  • National Centre for the Replacement Refinement and Reduction of Animals in Research
  • Wellcome Trust
  • Moorfields Eye Charity
PUBLISHED 17 Mar 2022
https://doi.org/10.12688/f1000research.39214.2
Opinion Article metrics
Revised
A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing
[version 2; peer review: 1 approved, 2 approved with reservations]
Mauro Petrillo, Marco Fabbri, Dafni Maria Kagkli, Maddalena Querci, Guy Van den Eede, Erik Alm, Derya Aytan-Aktug, Salvador Capella-Gutierrez, Catherine Carrillo, Alessandro Cestaro, Kok-Gan Chan, Teresa Coque, Christoph Endrullat, Ivo Gut, Paul Hammer, Gemma L. Kay, Jean-Yves Madec, Alison E. Mather, Alice Carolyn McHardy, Thierry Naas, Valentina Paracchini, Silke Peter, Arthur Pightling, Barbara Raffael, John Rossen, Etienne Ruppé, Robert Schlaberg, Kevin Vanneste, Lukas M. Weber, Henrik Westh, Alexandre Angers-Loustau
Peer Reviewers Rene Hendriksen; Anna Abramova and Marcus Wenne; Enrico Lavezzo and Emilio Ispano
  • Funders
  • Biotechnology and Biological Sciences Research Counci
  • European Commission
LATEST VERSION PUBLISHED 16 Mar 2022
https://doi.org/10.12688/f1000research.54864.2
Research Article metrics
Revised
The need to reassess single-cell RNA sequencing datasets: the importance of biological sample processing
[version 2; peer review: 2 approved]
Alex M. Ascensión, Marcos J. Araúzo-Bravo, Ander Izeta
Peer Reviewers Xiao Long and Zhujun Li; (Jo) Huiqing Zhou
  • Funders
  • Hezkuntza, Hizkuntza Politika Eta Kultura Saila, Eusko Jaurlaritza
  • Instituto de Salud Carlos III
  • Horizon 2020
  • European Regional Development Fund
LATEST VERSION PUBLISHED 08 Mar 2022
https://doi.org/10.12688/f1000research.109365.1
Research Article metrics
Performance of the T cell senescence markers in predicting the active disease of systemic lupus erythematosus
[version 1; peer review: 1 approved, 1 approved with reservations, 1 not approved]
Kusworini Handono, Mirza Zaka Pratama, Radiyati Umi Partan, Hani Susianti, Nimas Eka Firdaningrum, Siti Roziah Ria Famuji, Ade Wildan Rizky Fachry, Norma Hanifah Sumarta, Handono Kalim
Peer Reviewers Tak Mao Chan; Giuseppe A Ramirez; Marija Jelusic and Mario Šestan
  • Funder
  • Kementerian Riset dan Teknologi /Badan Riset dan Inovasi Nasional
PUBLISHED 07 Mar 2022
https://doi.org/10.12688/f1000research.108667.2
Review metrics
Revised
COVID-19, Cation Dysmetabolism, Sialic Acid, CD147, ACE2, Viroporins, Hepcidin and Ferroptosis: A Possible Unifying Hypothesis
[version 2; peer review: 2 approved]
Attilio Cavezzi, Roberto Menicagli, Emidio Troiani, Salvatore Corrao
Peer Reviewers Ming Yang; Piotr H. Pawlowski
LATEST VERSION PUBLISHED 28 Feb 2022
https://doi.org/10.12688/f1000research.109251.1
Brief Report metrics
Automated phenol-chloroform extraction of high molecular weight genomic DNA for use in long-read single-molecule sequencing
[version 1; peer review: 2 approved]
Andrew W. Liu, Alejandro Villar-Briones, Nicholas M. Luscombe, Charles Plessy
Peer Reviewers Genki N. Kanda; Shan Wei
  • Funder
  • Japan Society for the Promotion of Science
PUBLISHED 28 Feb 2022
https://doi.org/10.12688/f1000research.94159.1
Software Tool Article metrics
miND (miRNA NGS Discovery pipeline): a small RNA-seq analysis pipeline and report generator for microRNA biomarker discovery studies
[version 1; peer review: 2 approved with reservations]
Andreas Diendorfer, Kseniya Khamina, Marianne Pultar, Matthias Hackl
Peer Reviewers Kristian Almstrup, Nina Mørup and Ailsa Maria Main; Francisco J. Enguita
  • Funder
  • Innovative Medicines Initiative 2
PUBLISHED 24 Feb 2022
https://doi.org/10.12688/f1000research.28352.2
Method Article metrics
Revised
Methods for sequencing the pandemic: benefits of rapid or high-throughput processing
[version 2; peer review: 2 approved]
Megan L. Folkerts, Darrin Lemmer, Ashlyn Pfeiffer, Danielle Vasquez, Chris French, Amber Jones, Marjorie Nguyen, Brendan Larsen, W. Tanner Porter, Krystal Sheridan, Jolene R. Bowers, David M. Engelthaler
Peer Reviewers Bronwyn MacInnis; Keith Crandall
  • Funders
  • Arizona Department of Health Services
  • The NARBHA institute
LATEST VERSION PUBLISHED 21 Feb 2022
https://doi.org/10.12688/f1000research.75243.1
Software Tool Article metrics
SASCRiP: A Python workflow for preprocessing UMI count-based scRNA-seq data
[version 1; peer review: 2 approved with reservations]
Darisia Moonsamy, Nikki Gentle
Peer Reviewers Fabiola Curion and Luke Zappia; Fangming Xie
  • Funder
  • National Research Foundation
PUBLISHED 15 Feb 2022
201-220 of 279 ARTICLES
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