Pathogens
Pathogens
Research Article
metrics
Revised
Increase of SARS-CoV-2 RNA load in faecal samples prompts for rethinking of SARS-CoV-2 biology and COVID-19 epidemiology
[version 3; peer review: 2 approved]
Peer Reviewers
Kourosh Honarmand Ebrahimi;
Margarita Aguilera
- Funder
- Joint Research Centre
Brief Report
metrics
Revised
Expression of TNF, IL1B, and iNOS2 in the neural cell after induced by Porphyromonas gingivalis with and without coating antibody anti-Porphyromonas gingivalis
[version 4; peer review: 2 approved]
Peer Reviewers
Hadhimulya Asmara;
Widya Lestari
- Funder
- Kementerian Riset Teknologi Dan Pendidikan Tinggi Republik Indonesia
Research Article
metrics
Revised
Association of subgingival Epstein–Barr virus and periodontitis
[version 2; peer review: 2 approved]
Peer Reviewers
Muhammad Sohail Zafar;
Shahida Mohd-Said
- Funder
- Universitas Indonesia
Data Note
metrics
Revised
A global repository of novel antimicrobial emergence events
[version 2; peer review: 1 approved, 2 approved with reservations]
Peer Reviewers
Sergey Eremin;
Ellen Stobberingh;
Jorge Pinto Ferreira
- Funder
- United States Agency for International Development
Software Tool Article
metrics
Revised
o2geosocial: Reconstructing who-infected-whom from routinely collected surveillance data
[version 2; peer review: 1 approved, 2 approved with reservations]
Peer Reviewers
Paige B. Miller;
Eben Kenah;
Gerry Tonkin Hill
- Funders
- Wellcome Trust Senior Research Fellowship in Basic Biomedical Science
- Medical Research Council
- Sir Henry Dale Fellowship jointly funded by the Wellcome Trust and the Royal Society
Research Article
metrics
Characterization of SARS-CoV-2 East Java isolate, Indonesia
[version 1; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Aulanni’am Aulanni'am;
Lidia Audrey Rocha Valadas;
Marina Derkho
- Funder
- Ministry of Research and Technology; Ministry of Health of the Republic of Indonesia
Systematic Review
metrics
Revised
SARS-CoV-2 and the role of fomite transmission: a systematic review
[version 3; peer review: 2 approved]
Peer Reviewers
Emanuel Goldman;
Ana Karina Pitol Garcia
- Funder
- World Health Organization
Brief Report
metrics
Peer Reviewers
Ingo Ebersberger and Ruben Iruegas;
Takahiko Koyama;
Jale Moradi
- Funders
- National Institute for Health Research
- Genome Canada
Research Article
metrics
Revised
β-lactamases (bla TEM, bla SHV, bla CTXM-1, bla VEB, bla OXA-1) and class C β-lactamases gene frequency in Pseudomonas aeruginosa isolated from various clinical specimens in Khartoum State, Sudan: a cross sectional study
[version 3; peer review: 2 approved]
Peer Reviewers
Nobumichi Kobayashi;
Muhammad Qasim
Research Article
metrics
Revised
Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim
[version 2; peer review: 3 approved]
Peer Reviewers
Tanvi Honap;
Miguel Viveiros and João Perdigão;
Ola B. Brynildsrud
- Funders
- Swiss National Science Foundation
- European Research Council
Research Article
metrics
Revised
Population characterization and parasitological assessment of the giant African snail (Achatina fulica) in urban areas of Cartagena, Colombia
[version 2; peer review: 1 approved, 2 approved with reservations]
Peer Reviewers
Diego E. Gutiérrez Gregoric;
Jenny J Chaparro Gutiérrez;
Roshmi Rekha Sarma
- Funder
- District Administrative Department of Health (DADIS) - Cartagena de Indias, Colombia
Research Article
metrics
The art and science of achieving zero COVID-19 transmissions in staff at a large community care facility in Singapore using implementation science: a retrospective analysis
[version 1; peer review: 1 approved]
Peer Reviewers
Lisa Hall
Research Article
metrics
Revised
Bottled water brands are contaminated with multidrug resistant bacteria in Nairobi, Kenya
[version 2; peer review: 2 approved]
Peer Reviewers
Ahmad Zarei;
Lucy A. Semerjian
- Funder
- Kenya Medical Research Institute
Research Article
metrics
Revised
Detection of antifungal drug-resistant and ERG11 gene mutations among clinical isolates of Candida species isolated from Khartoum, Sudan.
[version 2; peer review: 2 approved, 1 not approved]
Peer Reviewers
Rasoul Mohammadi;
Raja Ahsan Aftab;
Muhammad Sajid Hamid Akash
Research Article
metrics
Revised
A proposed molecular mechanism for pathogenesis of severe RNA-viral pulmonary infections
[version 2; peer review: 4 approved]
Peer Reviewers
Maurizio Romano;
Mansi Srivastava;
Gregory Fonseca;
Ian Eperon
- Funders
- Compute Canada
- Canada Foundation for Innovation
- Canada Research Chairs
Research Article
metrics
Use of 16s rRNA to identify non-lactose-fermenting bacilli and molecular detection of ESBL resistance genes associated with hospital-acquired infection in Soba University Hospital, Sudan
[version 1; peer review: 1 approved]
Peer Reviewers
Asim Elnour
Software Tool Article
metrics
PEER REVIEW DISCONTINUED
VTES: a stochastic Python-based tool to simulate viral transmission
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
- Funders
- University of Surrey
- National Institutes of Health
Brief Report
metrics
Revised
Anti-pathogenic potential of a classical ayurvedic Triphala formulation
[version 2; peer review: 2 approved]
Peer Reviewers
Shibabrata Pattanayak;
Felipe Alves de Almeida
- Funder
- Nirma Education and Research Foundation
Research Article
metrics
Population structure of Salmonella enterica serotype Mbandaka reveals similar virulence potential irrespective of source and phylogenomic stratification
[version 1; peer review: 2 approved]
Peer Reviewers
Mohamed N. Seleem;
Shaankumar Mooyottu
- Funder
- National Institute of Food and Agriculture
Brief Report
metrics
Update
Predicting the evolution and control of the COVID-19 pandemic in Portugal
[version 2; peer review: 2 approved]
Peer Reviewers
Elves Heleno Duarte;
Kamal Shah