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https://doi.org/10.12688/f1000research.156046.2
Research Article metrics
Revised
Development of an Affordable Silicone Phantom of The Kidney with 3D Printed Mould for Ultrasound Guided Percutaneous Nephrolithotomy Training in Indonesia
[version 2; peer review: 2 approved]
Rananda Anggakara Hendarmo, Ponco Birowo, Nur Rasyid, Irfan Wahyudi, Gerhard Reinaldi Situmorang, Widi Atmoko, Mahesh Ramanlal Desai, Kevin Yonathan, Jonathan Pratama Swannjo
Peer Reviewers Enrique Pulido-Contreras; Ben H. Chew
  • Funder
  • Universitas Indonesia
LATEST VERSION PUBLISHED 23 Jul 2025
https://doi.org/10.12688/f1000research.166855.1
Software Tool Article metrics
KICA: A MATLAB package for high-throughput analysis of calcium and voltage imaging data from cardiac cells
[version 1; peer review: 1 approved with reservations]
Satya N.V Arjunan, Anton Shpak, George W. Parker, Adam P. Hill
Peer Reviewers Amelia S Power and Amanda Groenewald
  • Funders
  • Targeted Translation Research Accelerator
  • New South Wales Office for Health and Medical Research
PUBLISHED 17 Jul 2025
https://doi.org/10.12688/f1000research.164345.1
Software Tool Article metrics
‘dstidyverse’: An Implementation of TidyverseWithin the DataSHIELD Ecosystem
[version 1; peer review: 1 approved]
Tim Cadman, Mariska Slofstra, Demetris Avraam, Eleanor Hyde, Niels Kikkert, Marije van der Geest, Dick Postma, Ruben Veenstra, Stuart Wheater, Erik Zwart, Morris Swertz
Peer Reviewers Miroslav Puskaric
  • Funder
  • HORIZON EUROPE Reforming and enhancing the European Research and Innovation system
PUBLISHED 20 Jun 2025
https://doi.org/10.12688/f1000research.162495.1
Brief Report metrics
A Preclinical Model of Human Liver Using Precision Cut Tissue Slice Culture
[version 1; peer review: 2 approved, 1 approved with reservations]
Owen McGreevy, Timothy Gilbert, Maria-Danae Jessel, Mohammed Bosakhar, Stephen Fenwick, Hassan Malik, Christopher Goldring, Laura Randle
Peer Reviewers Raymond S W Yeung; Sonam Gurung; Una Rastovic and Elena Palma
  • Funders
  • National Centre for the Replacement, Refinement and Reduction of Animals in Research
  • North West Cancer Research
PUBLISHED 10 Jun 2025
https://doi.org/10.12688/f1000research.160348.1
Research Article metrics
Design and Development of Automated Ultraviolet (UV-C) Surface Sterilizer and Disinfection Device Using a User-Centered Design Approach
[version 1; peer review: 1 not approved]
Esubalew Belay, Habtamu Abafoge, Fayid Ahmed, Bikila Alemu, Samuel Sisay
Peer Reviewers Mateusz Wdowiak
  • Funder
  • The International Development Research Centre
PUBLISHED 21 May 2025
https://doi.org/10.12688/f1000research.141178.2
Research Article metrics
Revised
Comparison of treatment planning for stereotactic radiosurgery and stereotactic body radiation therapy techniques with 2.5mm and 5mm multileaf collimator (MLC): A pilot study
[version 2; peer review: 2 approved]
Rechal Nisha Dsouza, Krishna Sharan, Suresh Sukumar, Srinidhi G Chandraguthi, Shreekripa Rao, Shirley Lewis, Umesh V, Senthil Manikandan
Peer Reviewers Michele Zeverino; Mary Joan
LATEST VERSION PUBLISHED 17 Mar 2025
https://doi.org/10.12688/f1000research.158181.1
Research Article metrics
Role of continuous wave vs pulse wave and color doppler in identifying arterial perforators of lower limb
[version 1; peer review: 1 not approved]
Ajit Mahale, Sanyam Khatyal, DEEPAK PINTO, DEEPU VIJAYSENAN, Sonali Ullal, Merwyn Fernandes, Sonali Prabhu, Fathima Raeesa
Peer Reviewers Shuhei Yoshida
  • Funder
  • NO FUNDING
PUBLISHED 28 Jan 2025
https://doi.org/10.12688/f1000research.158910.1
Method Article metrics
A humanised thrombus-on-a-chip model utilising tissue-engineered arterial constructs: A method to reduce and replace mice used in thrombosis and haemostasis research.
[version 1; peer review: 1 approved, 3 approved with reservations]
Jacob Ranjbar, Jonathan M. Gibbins, Jordan Roe, Paul Roach, Ying Yang, Alan G.S. Harper
Peer Reviewers Michael Emerson; Navaneeth Krishna Rajeeva Pandian; Kaushik N. Shankar; Fahima Akther
  • Funders
  • British Heart Foundation
  • Keele University Open Research grant
  • National Centre for the Replacement Refinement and Reduction of Animals in Research
PUBLISHED 20 Jan 2025
https://doi.org/10.12688/f1000research.154680.2
Research Article metrics
Revised
Role of Artificial intelligence model in prediction of low back pain using T2 weighted MRI of Lumbar spine
[version 2; peer review: 2 approved, 1 approved with reservations, 1 not approved]
Ali Muhaimil, Saikiran Pendem, Niranjana Sampathilla, Priya P S, Kaushik Nayak, Krishnaraj Chadaga, Anushree Goswami, Obhuli Chandran M, Abhijith S
Peer Reviewers Priyanka Chandrasekhar; Tarun Gangil; Shashi Kumar Shetty; Eugene Ozhinsky
  • Funder
  • Nil
LATEST VERSION PUBLISHED 10 Oct 2024
https://doi.org/10.12688/f1000research.146327.2
Software Tool Article metrics
Revised
Spot Spine, a freely available ImageJ plugin for 3D detection and morphological analysis of dendritic spines
[version 2; peer review: 2 approved, 3 approved with reservations]
Jean-Francois Gilles, Philippe Mailly, Tiago Ferreira, Thomas Boudier, Nicolas Heck
Peer Reviewers Jiang-Ning Zhou and Qing-Hong Shan; Georgina M Aldridge; Andreas Kist; Ming Hu; Elizabeth McCullagh
  • Funder
  • Centre National de la Recherche Scientifique (CNRS), Sorbonne Université and Institut pour la Recherche en Santé Publique (IReSP)
LATEST VERSION PUBLISHED 05 Sep 2024
https://doi.org/10.12688/f1000research.145101.2
Review metrics
Revised
Exploring the Synergistic Potential of Pectin-Chitosan Composites for Advanced Drug Delivery and Biomedical Implant Applications: A Comprehensive Review and Future Perspectives
[version 2; peer review: 1 approved, 1 not approved]
Mohammed Hussein M. Alsharbaty, Ghassan A. Naji, Sameh S. Ali
Peer Reviewers Bhisham Narayan Singh; Sagar Salave
  • Funder
  • Nil
LATEST VERSION PUBLISHED 04 Sep 2024
https://doi.org/10.12688/f1000research.145052.3
Research Article metrics
Revised
Exploring the acceptance of robotic assisted surgery among the Indian population: An empirical investigation
[version 3; peer review: 2 approved]
Smitha Nayak, Vinod C. Nayak, Sathvika G. S.
Peer Reviewers Nripesh Kumar Nrip; Kalayarasan Raja
LATEST VERSION PUBLISHED 20 Aug 2024
https://doi.org/10.12688/f1000research.152312.1
Method Article metrics
A novel low-rank reconstruction framework for precise fat-tumor discrimination in diffusion-weighted MRI
[version 1; peer review: 1 approved with reservations, 1 not approved]
Rohan Senthilkumar
Peer Reviewers Ying-Chia Lin; Ye Wu
PUBLISHED 13 Aug 2024
https://doi.org/10.12688/f1000research.154455.1
Software Tool Article metrics
CINNAMON-GUI: Revolutionizing Pap Smear Analysis with CNN-Based Digital Pathology Image Classification
[version 1; peer review: 2 approved]
Luca Zammataro
Peer Reviewers Fabio Grizzi; Gabriella Casalino
PUBLISHED 06 Aug 2024
https://doi.org/10.12688/f1000research.144871.1
Research Article metrics
High throughput biological sequence analysis using machine learning-based integrative pipeline for extracting functional annotation and visualization
[version 1; peer review: 2 approved with reservations]
Md Al Amin, Feroza Naznin, Most Nilufa Yeasmin, Md Sumon Sarkar, Md Misor Mia, Abdullahi Chowdhury, Md Zahidul Islam
Peer Reviewers Farizky Martriano Humardani; Hemant Kulkarni
PUBLISHED 07 Mar 2024
https://doi.org/10.12688/f1000research.140950.2
Research Article metrics
Revised
A systematic review of trends in photobiomodulation in dentistry between 2018 and 2022: advances and investigative agenda
[version 2; peer review: 2 approved, 1 approved with reservations]
David Yeret Rodriguez Salazar, Jimmy Alain Málaga Rivera, José Edinson Laynes Effio, Alejandro Valencia-Arias
Peer Reviewers Herney Andres Garcia-Perdomo; Brenda Yuliana Herrera Serna; Idalia Rodríguez Delgado and Norma Cruz Fierro
LATEST VERSION PUBLISHED 28 Dec 2023
https://doi.org/10.12688/f1000research.74502.2
Opinion Article metrics
Revised
ELIXIR and Toxicology: a community in development
[version 2; peer review: 2 approved]
Marvin Martens, Rob Stierum, Emma L. Schymanski, Chris T. Evelo, Reza Aalizadeh, Hristo Aladjov, Kasia Arturi, Karine Audouze, Pavel Babica, Karel Berka, Jos Bessems, Ludek Blaha, Evan E. Bolton, Montserrat Cases, Dimitrios Ε. Damalas, Kirtan Dave, Marco Dilger, Thomas Exner, Daan P. Geerke, Roland Grafström, Alasdair Gray, John M. Hancock, Henner Hollert, Nina Jeliazkova, Danyel Jennen, Fabien Jourdan, Pascal Kahlem, Jana Klanova, Jos Kleinjans, Todor Kondic, Boï Kone, Iseult Lynch, Uko Maran, Sergio Martinez Cuesta, Hervé Ménager, Steffen Neumann, Penny Nymark, Herbert Oberacher, Noelia Ramirez, Sylvie Remy, Philippe Rocca-Serra, Reza M. Salek, Brett Sallach, Susanna-Assunta Sansone, Ferran Sanz, Haralambos Sarimveis, Sirarat Sarntivijai, Tobias Schulze, Jaroslav Slobodnik, Ola Spjuth, Jonathan Tedds, Nikolaos Thomaidis, Ralf J.M. Weber, Gerard J.P. van Westen, Craig E. Wheelock, Antony J. Williams, Hilda Witters, Barbara Zdrazil, Anže Županič, Egon L. Willighagen
Peer Reviewers Christopher Southan; Marta Eide
  • Funders
  • Eesti Teadusagentuur
  • Bundesministerium für Bildung und Forschung
  • LIFE programme
  • Miguel Servet
  • Agence Nationale de la Recherche
  • Horizon 2020
  • Stiftelsen Forska Utan Djurförsök
  • Wellcome Trust
  • Umweltbundesamt
  • H2020 Marie Skłodowska-Curie Actions
  • European Regional Development Fund
LATEST VERSION PUBLISHED 03 Oct 2023
https://doi.org/10.12688/f1000research.109134.3
Research Article metrics
Revised
Emvolio - A battery operated portable refrigerator preserves biochemical and haematological integrity of biological samples in preclinical studies
[version 3; peer review: 2 approved]
Swastika Maity, Jaya Aakriti, Suman Manandhar, Sharad B Anchan, Ashlesh Bhat, Mayur U Shetty, Yogendra Nayak
Peer Reviewers Ciro Aprea; Yuanheng Zhao
LATEST VERSION PUBLISHED 22 Sep 2023
https://doi.org/10.12688/f1000research.130863.1
Review metrics
Biosensors for therapeutic drug monitoring: a review
[version 1; peer review: 2 not approved]
Wervyan Shalannanda, Ardianto Satriawan, Muhammad Fairuziko Nurrajab, Anchelmia Chyntia Hanna Ayulestari, Diah Ayu Safitri, Finna Alivia Nabila, Casi Setianingsih, Isa Anshori
Peer Reviewers Henrik Endeman; Matteo Conti
PUBLISHED 13 Feb 2023
https://doi.org/10.12688/f1000research.73108.2
Research Article metrics
Revised
Ensemble of multimodal deep learning autoencoder for infant cry and pain detection
[version 2; peer review: 3 approved with reservations, 2 not approved]
Yosi Kristian, Natanael Simogiarto, Mahendra Tri Arif Sampurna, Elizeus Hanindito, Visuddho Visuddho
Peer Reviewers Ghazal Bargshady; Abdulaziz Saleh Ba Wazir; Rohan Borgalli; Lucas Pereira Carlini; Alwin Poulose
  • Funder
  • Grant Information
LATEST VERSION PUBLISHED 30 Jan 2023
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