Pathogens

Pathogens

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81-100 of 183 ARTICLES
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https://doi.org/10.12688/f1000research.26756.2
Research Article metrics
Revised
Characterization of sulfated polysaccharide activity against virulent Plasmodium falciparum PHISTb/RLP1 protein
[version 2; peer review: 2 approved]
Jennifer M. Mutisya, Victor A. Mobegi, Johnson K. Kinyua, Martha N. Kivecu, Raphael O. Okoth, Gladys C. Chemwor, Edwin W. Mwakio, Agnes C. Cheruiyot, Redempta A. Yeda, Charles O. Okello, Jackline A. Juma, Benjamin H. Opot, Dennis W. Juma, Amanda L. Roth, Hosea M. Akala, Ben M. Andagalu
Peer Reviewers Eusébio Macete; Abraham Madariaga
  • Funders
  • DELTAS Africa Initiative
  • Armed Forces Health Surveillance Branch
LATEST VERSION PUBLISHED 29 Apr 2022
https://doi.org/10.12688/f1000research.72914.2
Research Article metrics
Revised
Seroprevalence and risk factors of SARS-CoV-2 infection in an urban informal settlement in Nairobi, Kenya, December 2020
[version 2; peer review: 2 approved]
Patrick K Munywoki, Caroline Nasimiyu, Moshe Dayan Alando, Nancy Otieno, Cynthia Ombok, Ruth Njoroge, Gilbert Kikwai, Dennis Odhiambo,, Mike Powel Osita, Alice Ouma, Clifford Odour, Bonventure Juma, Caroline A Ochieng, Immaculate Mutisya, Isaac Ngere, Jeanette Dawa, Eric Osoro, M Kariuki Njenga, Godfrey Bigogo, Peninah Munyua, Terrence Q Lo, Elizabeth Hunsperger, Amy Herman-Roloff
Peer Reviewers Sarah R. Haile; Tatjana Vilibic-Cavlek
  • Funders
  • US National Institutes of Health
  • U.S. Centers for Disease Control and Prevention
LATEST VERSION PUBLISHED 11 Apr 2022
https://doi.org/10.12688/f1000research.109586.1
Research Article metrics
Interaction of surface glycoprotein of SARS-CoV-2 variants of concern with potential drug candidates: A molecular docking study
[version 1; peer review: 2 approved, 1 not approved]
Anuj Mavlankar, Afzal Ansari, Mukul Sharma, Purna Dwivedi, Pushpendra Singh
Peer Reviewers Akinwunmi Oluwaseun Adeoye; Nurdjannah Jane Niode; Thomas Caulfield
  • Funders
  • Research to Stop Neglected Tropical Diseases transmission (R2STOP)
  • Leprosy Research Initiative
  • Indian Council of Medical Research
  • Department of Biotechnology, Ministry of Science and Technology, India
PUBLISHED 07 Apr 2022
https://doi.org/10.12688/f1000research.75677.1
Research Article metrics
Design-of-experiments in vitro transcription yield optimization of self-amplifying RNA
[version 1; peer review: 2 approved with reservations]
Karnyart Samnuan, Anna K Blakney, Paul F McKay, Robin J Shattock
Peer Reviewers Rok Sekirnik; Emily Voigt and Devin Brandt
  • Funders
  • European Commission H2020
  • Engineering and Physical Sciences Research Council
PUBLISHED 18 Mar 2022
https://doi.org/10.12688/f1000research.39214.2
Opinion Article metrics
Revised
A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing
[version 2; peer review: 1 approved, 2 approved with reservations]
Mauro Petrillo, Marco Fabbri, Dafni Maria Kagkli, Maddalena Querci, Guy Van den Eede, Erik Alm, Derya Aytan-Aktug, Salvador Capella-Gutierrez, Catherine Carrillo, Alessandro Cestaro, Kok-Gan Chan, Teresa Coque, Christoph Endrullat, Ivo Gut, Paul Hammer, Gemma L. Kay, Jean-Yves Madec, Alison E. Mather, Alice Carolyn McHardy, Thierry Naas, Valentina Paracchini, Silke Peter, Arthur Pightling, Barbara Raffael, John Rossen, Etienne Ruppé, Robert Schlaberg, Kevin Vanneste, Lukas M. Weber, Henrik Westh, Alexandre Angers-Loustau
Peer Reviewers Rene Hendriksen; Anna Abramova and Marcus Wenne; Enrico Lavezzo and Emilio Ispano
  • Funders
  • Biotechnology and Biological Sciences Research Counci
  • European Commission
LATEST VERSION PUBLISHED 16 Mar 2022
https://doi.org/10.12688/f1000research.110281.1
Systematic Review metrics
Seroconversion rates among different designs of COVID-19 vaccines: a network meta-analysis of randomized controlled trials
[version 1; peer review: 1 approved with reservations]
Gatot Soegiarto, Jonny Karunia Fajar, Laksmi Wulandari, Muhammad Anshory, Muhammad Ilmawan, Anisa Asmiragani, Himma Illiyana, Azaria Adam, Sutini Lamadi, Umi Sa'adah, Tubagus Yuantoko, Esi Nanda, Farida Rachmawati, Nabila Rahmadani, Randy Talilah, Madyline Katipana, Sharon Susanto, Maria Hindom, Ufi Anjasari, Nur Hidayah, Nanda Fadilla, Vanela Lekatompessy, Uzi Phoenna, Fredo Tamara, Dessy Aprilia Kartini, Aditya Indra Mahendra, Andi Permana, Erwin Alexander Pasaribu, Kuldeep Dhama, Harapan Harapan
Peer Reviewers Jonghoon Kang
PUBLISHED 10 Mar 2022
https://doi.org/10.12688/f1000research.108667.2
Review metrics
Revised
COVID-19, Cation Dysmetabolism, Sialic Acid, CD147, ACE2, Viroporins, Hepcidin and Ferroptosis: A Possible Unifying Hypothesis
[version 2; peer review: 2 approved]
Attilio Cavezzi, Roberto Menicagli, Emidio Troiani, Salvatore Corrao
Peer Reviewers Ming Yang; Piotr H. Pawlowski
LATEST VERSION PUBLISHED 28 Feb 2022
https://doi.org/10.12688/f1000research.75537.1
Research Article metrics
COVID-19: Comparison of immunogenicity response between natural and post-vaccination infections
[version 1; peer review: 1 approved, 1 not approved]
Ivonne Elisabeth Rotty, Erwin Kristanto, Sekplin Sekeon, Henny Ruth Liwe, Neni Ekawardani
Peer Reviewers Anggraini Dwi Sensusiati; Marios Politis
  • Funder
  • RSUP Prof.dr.R.D Kandou
PUBLISHED 22 Feb 2022
https://doi.org/10.12688/f1000research.26452.1
Software Tool Article metrics
Lessons learned in virulence factor identification and data management from a hackathon on microbial virulence
[version 1; peer review: 1 approved, 1 approved with reservations]
Brett E. Pickett, Ryan Connor, Tamiru Berhanu-Denka, Sherry Bhalla, Vyacheslav Brover, Michael James Chambers, Kumardeep Chaudhary, Ousmane H. Cissé, Allissa Dillman, Moamen M. Elmassry, Michael Feldgarden, Eric Holloway, Xin Huang, William Klimke, Catarina Inês Mendes, S. Elizabeth Norred, Jonathan Parkinson, Samantha Sevilla, Monica Garcia Solache, Defne Surujon, Udana Torian, Vadim Zalunin, Ben Busby
Peer Reviewers Rick Stevens and James Davis; Kevin Tyler
  • Funders
  • Fundação para a Ciência e a Tecnologia
  • Scientific and Technological Research Council of Turkey
  • Intramural Research Program of the National Library of Medicine
PUBLISHED 09 Feb 2022
https://doi.org/10.12688/f1000research.52785.2
Brief Report metrics
Revised
Global stability analysis of hepatitis B virus dynamics
[version 2; peer review: 2 approved, 1 approved with reservations]
Olajumoke Oludoun, Olukayode Adebimpe, James Ndako, Oluwakemi E. Abiodun, Babatunde Gbadamosi, Benedicta B. Aladeitan
Peer Reviewers Abimbola Abolarinwa; Ran Zhang; Syafruddin Side
LATEST VERSION PUBLISHED 21 Jan 2022
https://doi.org/10.12688/f1000research.28327.2
Review metrics
Revised
Novel antifungal agents in clinical trials
[version 2; peer review: 2 approved]
Samantha E. Jacobs, Panagiotis Zagaliotis, Thomas J. Walsh
Peer Reviewers Charalampos Antachopoulos; Shahram Mahmoudi
  • Funder
  • Henry Schueller Foundation
LATEST VERSION PUBLISHED 12 Jan 2022
https://doi.org/10.12688/f1000research.74018.2
Research Article metrics
Revised
Crystal structure of Pseudomonas aeruginosa FabB C161A, a template for structure-based design for new antibiotics
[version 2; peer review: 2 approved]
Vladyslav Yadrykhins'ky, Charis Georgiou, Ruth Brenk
Peer Reviewers Bjarte A. Lund; Klaus Reuter
  • Funder
  • Norges Forskningsråd
LATEST VERSION PUBLISHED 10 Jan 2022
https://doi.org/10.12688/f1000research.73568.1
Research Article metrics AWAITING PEER REVIEW
May Mutation of SNP rs1800947 Affects Length of Stay Outcome of COVID-19 suspects?
[version 1; peer review: awaiting peer review]
Zulmansyah Zulmansyah, Gaga Irawan Nugraha, Dwi Agustian, Dida Akhmad Gurnida
Peer Reviewers Invited
PUBLISHED 14 Dec 2021
https://doi.org/10.12688/f1000research.27915.4
Research Article metrics
Revised
Enhancement of pyocyanin production by subinhibitory concentration of royal jelly in Pseudomonas aeruginosa
[version 4; peer review: 3 approved, 1 approved with reservations]
Dina Auliya Amly, Puspita Hajardhini, Alma Linggar Jonarta, Heribertus Dedy Kusuma Yulianto, Heni Susilowati
Peer Reviewers Ariadna A. Djais; Theerthankar Das; Shizuo Kayama; Philip S. Bird
  • Funder
  • Ministry of Research, Technology and Higher Education, Republic of Indonesia
LATEST VERSION PUBLISHED 07 Dec 2021
https://doi.org/10.12688/f1000research.28105.4
Research Article metrics
Revised
Seroprevalence and characterisation of herpes simplex virus from human immunodeficiency virus in samples collected from two provinces in South Africa: a retrospective study
[version 4; peer review: 2 approved]
Oluwafemi Samuel Obisesan, Nomathamsanqa Patricia Sithebe, Hazel Tumelo Mufhandu
Peer Reviewers Oksana Debrah; Bongiwe Ndlovu
LATEST VERSION PUBLISHED 17 Nov 2021
https://doi.org/10.12688/f1000research.52168.2
Research Article metrics
Revised
Identification of potential inhibitors of SARS-CoV-2 S protein–ACE2 interaction by in silico drug repurposing
[version 2; peer review: 2 approved]
Fabiola E Tristán-Flores, Diana Casique-Aguirre, Raquel Pliego-Arreaga, Juan A Cervantes-Montelongo, Ponciano García-Gutierrez, Gerardo Acosta-García, Guillermo A Silva-Martínez
Peer Reviewers Fernando Yepes-Calderon; Yogendra Nayak and Krishnaprasad Baby
  • Funder
  • Consejo Nacional de Ciencia y Tecnología (CONACYT)
LATEST VERSION PUBLISHED 11 Nov 2021
https://doi.org/10.12688/f1000research.53541.2
Method Article metrics
Revised
Detection of herpes simplex virus 2: a SYBR-Green-based real-time PCR assay
[version 2; peer review: 2 approved]
Modhusudon Shaha, Bithi Roy, Mohammad Ariful Islam
Peer Reviewers ASM Monjur Al Hossain; Joyanta Modak
LATEST VERSION PUBLISHED 09 Nov 2021
https://doi.org/10.12688/f1000research.52433.3
Research Article metrics
Revised
Photophysical study and in vitro approach against Leishmania panamensis of dicloro-5,10,15,20-tetrakis(4-bromophenyl)porphyrinato Sn(IV)
[version 3; peer review: 2 approved]
Fabián Espitia-Almeida, Carlos Diaz-Uribe, William Vallejo, Doris Gómez-Camargo, Arnold R. Romero Bohórquez, Cristian Linares-Flores
Peer Reviewers John Mack; Martha Simões Ribeiro
  • Funders
  • Universidad del Atlántico
  • Consejo Nacional de Innovación, Ciencia y Tecnología
  • Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)
LATEST VERSION PUBLISHED 08 Nov 2021
https://doi.org/10.12688/f1000research.74169.1
Genome Note metrics
Isolation and sequencing of three RB49-like bacteriophages infecting O antigen-producing E. coli strains
[version 1; peer review: 1 approved, 1 approved with reservations]
Alexander Efimov, Eugene Kulikov, Alla Golomidova, Ilya Belalov, Vladislav Babenko, Andrey Letarov
Peer Reviewers Marcin Los; Mikael Skurnik
  • Funder
  • Ministry of Science and Higher Education of the Russian Federation, WCSC
PUBLISHED 03 Nov 2021
https://doi.org/10.12688/f1000research.73969.1
Research Article metrics
COVIDSpread: real-time prediction of COVID-19 spread based on time-series modelling
[version 1; peer review: 1 approved, 1 approved with reservations]
Siroos Shahriari, Taha Hossein Rashidi, AKM Azad, Fatemeh Vafaee
Peer Reviewers Mahdieh Allahviranloo; Ross Gore
  • Funder
  • Australian Research Council
PUBLISHED 03 Nov 2021
81-100 of 183 ARTICLES
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