Genomics and Genetics
Genomics and Genetics
Genome Note
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Revised
The complete chloroplast genome of Dianthus helenae, an endemic species with medicinal potential from the Nuratau Range, Uzbekistan
[version 2; peer review: 1 approved with reservations]
Peer Reviewers
Hoang Dang Khoa Do
Genome Note
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Revised
Complete chloroplast genomes of endemic Astragalus and Oxytropis species from Uzbekistan
[version 3; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers
Hoang Dang Khoa Do;
Yoshinori Fukasawa
- Funder
- This research was carried out within the framework of the projects “Digital Nature: Development of a digital platform for the flora of Central Uzbekistan” (2025–2029), and “Assessing climate change adaptation in endangered plants of Uzbekistan: A DNA barcoding approach” (AL-9224104464), implemented by the Institute of Botany, Academy of Sciences of the Republic of Uzbekistan.
Research Article
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Revised
Beyond the Beauty: Meristic and Genomic Signatures of Bangka’s Endemic Betta Fishes
[version 2; peer review: 2 approved with reservations]
Peer Reviewers
Bingpeng Xing;
Nicholas S Kron
- Funder
- Kementerian Riset Teknologi Dan Pendidikan Tinggi Republik Indonesia
Genome Note
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AWAITING PEER REVIEW
The complete chloroplast genome of Lepidium olgae, a narrow endemic species of the Nuratau Range, Uzbekistan
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
Genome Note
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AWAITING PEER REVIEW
The complete and annotated mitochondrial genome of Hemileia vastatrix Race I, causal agent of coffee leaf rust
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
- Funder
- Colombian Coffee Growers Federation (FNC) / National Coffee Research Center (CENICAFE)
Policy Brief
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AWAITING PEER REVIEW
Strengthening molecular biodiversity research and monitoring in Norway – connecting tools, data and people
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
- Funder
- The Research Council of Norway
Research Article
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Revised
The Genetic Association of Single Nucleotide Polymorphisms of SERPINE1 (rs6092) and IFNAR2 (rs1051393, rs2229207) Genes Is Related to Post Covid-19 Respiratory Syndrome
[version 2; peer review: 1 approved, 1 not approved]
Peer Reviewers
Shrikant Verma;
Abdullah Al Saba
- Funder
- Riset Inovasi dan Indonesia Maju–Lembaga Pengelola Dana Pendidikan
Review
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Revised
White paper: standards for handling and analyzing plant pan-genomes
[version 3; peer review: 3 approved, 1 approved with reservations]
Peer Reviewers
Sunil Kumar Sahu;
Xiaoming Xie;
Rutwik Barmukh;
Jianping Xu
- Funders
- ELIXIR under the call for proposals on Biodiversity, Food Safety and Pathogens
- Federal Ministry of Education and Research
Research Article
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Genomic characterization of ESBL-producing Escherichia coli isolates from patients in an orthopaedic ward in Mwanza, Tanzania
[version 1; peer review: 1 approved with reservations]
Peer Reviewers
Ayorinde O Afolayan
- Funders
- Fogarty International Center of the National Institutes of Health
- Grand Challenges Africa programme
- Grand Challenges Africa programme
Genome Note
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Complete genome sequence of Halorubrum pleomorphic virus 8
[version 1; peer review: 1 approved]
Peer Reviewers
Jimmy Saw
- Funders
- the University of Helsinki and Research Council of Finland by funding for FINStruct and Instruct Centre FI, part of Biocenter Finland and Instruct-ERIC and Horizon MSCA
- Research Council of Finland
- Helsinki University Library
- European Research Council (ERC) under the European Union’s Horizon Europe research and innovation programme
- Kone Foundation
Genome Note
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Revised
Draft genome sequence of a predatory bacterium from northern peatland soil
[version 2; peer review: 1 approved with reservations]
Peer Reviewers
Kai Blin and Judit Szenei
- Funders
- Research Council of Finland
- Kone Foundation
Research Article
metrics
Revised
First Gonadal Stages of Bonito, Sarda chiliensis (Perciformes: Scombridae) on the Pacific Coast of Northern Chile
[version 2; peer review: 2 approved, 1 not approved]
Peer Reviewers
Darmawan Setia Budi;
Constantinos C Mylonas;
Md. Mahiuddin Zahangir
- Funder
- Arturo Prat University
Research Article
metrics
Revised
Characterization of the Complete Mitochondrial Genome and Evaluation of COI Barcoding in Philonis inermis (Coleoptera: Curculionidae: Cryptorhynchinae) Using Genome Skimming
[version 3; peer review: 3 approved]
Peer Reviewers
Renee Ali;
Michael J Raupach;
Arun Arumugaperumal
- Funder
- This research was funded by the Gorgon Barrow Island Net Conservation Benefits Fund, administered by the Government of Western Australia, the Commonwealth Scientific and Industrial Research Organi-sation (CSIRO), and the Department of Biodiversity, Conservation and Attractions. Additional support was provided by Project Hermes 57653 (Universidad Nacional de Colombia, Sede Medellín).
Research Article
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Revised
Identification of Pathogenic PKHD1 Variants in Infants with Autosomal Recessive Polycystic Kidney Disease from the Dhofar Region, Oman
[version 2; peer review: 2 approved]
Peer Reviewers
Hana Yang;
Consolato M Sergi
- Funders
- Kidney Research UK
- LifeArc
- Horizon Europe
- Medical Research Council
Review
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Revised
Mechanisms Associated with PINK1 Variants in Parkinson's Disease
[version 2; peer review: 1 approved, 1 approved with reservations, 1 not approved]
Peer Reviewers
Eman Ezzeldien Mohamed;
Ryan L Davis;
DOMENICO PRATICO
Research Article
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AWAITING PEER REVIEW
Bioinformatic identification of abiotic stress tolerance genes in actinomycetes isolated from Lomas Cerro Campana, Peru
[version 1; peer review: awaiting peer review]
Peer Reviewers
Invited
- Funder
- PROCIENCIA/CONCYTEC
Research Article
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Revised
Genomic Epidemiology of SARS-CoV-2 variants in unvaccinated children found to be similar to that of adults with COVID-19 vaccinations
[version 2; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers
Matthew Hall;
Lia van der hoek
- Funders
- Health Security Partners, USA
- Higher Education Commission, Pakistan
Genome Note
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Annotated genome of the Eucalyptus snout beetle, Gonipterus sp. n. 2 (Coleoptera, Curculionidae)
[version 1; peer review: 1 approved with reservations, 1 not approved]
Peer Reviewers
Christopher Cunningham;
Maria Antonia Madrid Restrepo
- Funders
- National Research Foundation
- Future Leaders—African Independent Research (FLAIR) fellowship
Research Article
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Mutational and Functional Impact of β-globin Gene Mutation in Indonesian Thalassemia Patients using in Silico Method
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Anwer Faisal;
Rozhgar A. KHAILANY
- Funder
- Fakultas Kedokteran, Universitas Indonesia
Research Article
metrics
Revised
rs4889 and rs5782018 polymorphisms of KISS1 gene as genetic predisposing factor for PCOS in Indonesian women
[version 2; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Mukhri Hamdan;
Mushtak T. S. Al-Ouqaili;
Mohd Faizal Ahmad
- Funder
- Fakultas Kedokteran, Universitas Indonesia