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 in 
https://doi.org/10.12688/f1000research.121402.2
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Whole genome sequencing data of Candida krusei, the pathogen causing Candidaemia, from Department of Parasitology Culture Collection, Faculty of Medicine Universitas Indonesia
[version 2; peer review: 2 approved]
Fadilah Fadilah, Robiatul Adawiyah, Retno Wahyuningsih, Anna Rozaliyani, Ayu Eka Fatril, Rafika Indah Paramita, Linda Erlina, Khaerunissa Anbar Istiadi
Peer Reviewers Xuepeng Sun; Atanu Banerjee
  • Funder
  • Universitas Indonesia
LATEST VERSION PUBLISHED 29 Mar 2023
https://doi.org/10.12688/f1000research.130443.1
Research Article metrics
Assessing structure and disorder prediction tools for de novo emerged proteins in the age of machine learning
[version 1; peer review: 2 approved]
Margaux Aubel, Lars Eicholt, Erich Bornberg-Bauer
Peer Reviewers Caroline Weisman; Isabelle Callebaut
  • Funder
  • Volkswagen Foundation
PUBLISHED 29 Mar 2023
https://doi.org/10.12688/f1000research.126096.1
Research Article metrics
Comparison of BiP and HSP70i as markers of unfolded protein response (UPR) in segmental and nonsegmental vitiligo
[version 1; peer review: 2 approved with reservations]
Boedhy Setyanto, Handono Kalim, Sri Poeranto, Dhelya Widasmara
Peer Reviewers Mitesh Dwivedi; Shintaro Inoue
PUBLISHED 28 Mar 2023
https://doi.org/10.12688/f1000research.126227.3
Research Article metrics
Revised
Targeting Acanthamoeba proteins interaction with flavonoids of Propolis extract by in vitro and in silico studies for promising therapeutic effects
[version 3; peer review: 2 approved]
Imran Sama-ae, Suthinee Sangkanu, Abolghasem Siyadatpanah, Roghayeh Norouzi, Julalak Chuprom, Watcharapong Mitsuwan, Sirirat Surinkaew, Rachasak Boonhok, Alok K. Paul, Tooba Mahboob, Najme Sadat Abtahi, Tajudeen O. Jimoh, Sónia M.R. Oliveira, Madhu Gupta, Chea Sin, Maria de Lourdes Pereira, Polrat Wilairatana, Christophe Wiart, Mohammed Rahmatullah, Karma G. Dolma, Veeranoot Nissapatorn
Peer Reviewers Akm Moyeenul Huq; Ascel Samba-Louaka
  • Funder
  • The Royal Patronage of Her Royal Highness Princess Maha Chakri Sirindhorn - Botanical Garden of Walailak University
LATEST VERSION PUBLISHED 27 Mar 2023
https://doi.org/10.12688/f1000research.122949.2
Software Tool Article metrics
Revised
DEVEA: an interactive shiny application for Differential Expression analysis, data Visualization and Enrichment Analysis of transcriptomics data
[version 2; peer review: 2 approved]
Miriam Riquelme-Perez, Fernando Perez-Sanz, Jean-François Deleuze, Carole Escartin, Eric Bonnet, Solène Brohard
Peer Reviewers Hélène Hirbec; Wenbin Guo
  • Funder
  • PhD fellowship from the CEA (Amont-Aval).
LATEST VERSION PUBLISHED 24 Mar 2023
https://doi.org/10.12688/f1000research.54196.2
Research Article metrics
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Essential oil of Cymbopogon martini, source of geraniol, as a potential antibacterial agent against Bacillus subtilis, a pathogen of the bakery industry
[version 2; peer review: 2 approved]
Sara Santamarta, A. Cristina Aldavero, M Angeles Rojo
Peer Reviewers Daniel Rico; Abubakar Sunusi Adam
LATEST VERSION PUBLISHED 24 Mar 2023
https://doi.org/10.12688/f1000research.130734.1
Genome Note metrics
The first genome sequence of Anopheles squamous from Macha, Zambia
[version 1; peer review: 2 approved]
Valerie T. Nguyen, Travis C. Collier, Sangwoo Seok, Xiaodi Wang, Monicah M. Mburu, Limonty Simubali, Mary E. Gebhardt, Douglas E. Norris, Yoosook Lee
Peer Reviewers Megan A. Riddin; Tara Roth
  • Funders
  • Department of Entomology and Nematology, University of Florida
  • University of Florida
  • Johns Hopkins Malaria Research Institute, Johns Hopkins Bloomberg School of Public Health
  • National Institutes of Health
  • College of Agricultural and Life Sciences, University of Florida
  • Bloomberg Philanthropies
PUBLISHED 24 Mar 2023
https://doi.org/10.12688/f1000research.129581.1
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AmpSeqR: an R package for amplicon deep sequencing data analysis
[version 1; peer review: 1 approved, 2 approved with reservations]
Jiru Han, Jacob E. Munro, Melanie Bahlo
Peer Reviewers Eduardo Castro-Nallar; Cristian Koepfli and Gustavo Da Silva; Patrick Murigu Kamau Njage
  • Funders
  • National Health and Medical Research Council
  • Institute Infrastructure Support Scheme (IRIISS)
PUBLISHED 23 Mar 2023
https://doi.org/10.12688/f1000research.131637.1
Genome Note metrics
The complete genome sequences of Penicillium concavorugulosum
[version 1; peer review: 1 not approved]
Khosi Ramachela, Galaletsang Segone
Peer Reviewers Anthony A. Adegoke
PUBLISHED 23 Mar 2023
https://doi.org/10.12688/f1000research.131558.1
Research Article metrics
Restinga ectomycorrhizae: a work in progress
[version 1; peer review: 2 approved]
Ariadne N. M. Furtado, Marco Leonardi, Ornella Comandini, Maria Alice Neves, Andrea C. Rinaldi
Peer Reviewers Julieta Álvarez Manjarrez; Roberto Flores Arzù
PUBLISHED 22 Mar 2023
https://doi.org/10.12688/f1000research.131333.1
Data Note metrics
The identification of high-performing antibodies for transmembrane protein 106B (TMEM106B) for use in Western blot, immunoprecipitation, and immunofluorescence
[version 1; peer review: 1 approved, 2 approved with reservations]
Riham Ayoubi, Maryam Fotouhi, Kathleen Southern, Ritika Bhajiawala, Rebeka Fanti, Panagiotis Prinos, Peter S. McPherson, Carl Laflamme, NeuroSGC/YCharOS/EDDU collaborative group, ABIF Consortium
Peer Reviewers Dawn Smallwood; Christian Peter Moritz; Giuseppe Legname
  • Funders
  • Ontario Genomics
  • Canadian Institutes of Health Research Foundation
  • ALS Canada
  • ALS Association
  • Motor Neurone Disease Association
  • Genome Quebec
  • Mitacs
  • Genome Canada
PUBLISHED 21 Mar 2023
https://doi.org/10.12688/f1000research.130024.1
Research Article metrics
Identification of potential compounds for the management of multidrug-resistant tuberculosis using computational methods
[version 1; peer review: 2 not approved]
Winnie Gatwiri, Richard Kagia
Peer Reviewers Manish Dwivedi; Grace Mugumbate
PUBLISHED 17 Mar 2023
https://doi.org/10.12688/f1000research.131600.1
Genome Note metrics
The complete mitochondrial genome Hainan Gymnure Neohylomys hainanensis
[version 1; peer review: 2 approved with reservations]
Feiyun Tu, Xiaodan Hou, Qiujie Lu, Xiaofei Zhai
Peer Reviewers Michael Allen; Perinçek Seçkinozan Şeker
  • Funder
  • Natural Science Foundation of Hainan Province
PUBLISHED 16 Mar 2023
https://doi.org/10.12688/f1000research.123044.3
Brief Report metrics
Revised
Enhancement of the activity of the antimicrobial peptides HNP1 and LL-37 by bovine pancreatic ribonuclease A
[version 3; peer review: 1 approved, 2 approved with reservations, 1 not approved]
Bryan Ericksen
Peer Reviewers William R. Jacobs; Bouke K. H. L. Boekema; Ramakrishnan Nagaraj; Paweł M. Krzysciak
  • Funder
  • Peprotech, Inc.
LATEST VERSION PUBLISHED 13 Mar 2023
https://doi.org/10.12688/f1000research.131522.1
Research Article metrics
Seasonal effects decouple SARS-CoV-2 haplotypes worldwide
[version 1; peer review: 2 approved]
Tre Tomaszewski, Muhammad Asif Ali, Kelsey Caetano-Anollés, Gustavo Caetano-Anollés
Peer Reviewers Francisco Solano Muñoz; Kyung Mo Kim
  • Funders
  • National Centre for Supercomputing Applications
  • Office of Research and Office of International Programs, College of Agricultural, Consumer and Environmental Sciences, University of Illinois at Urbana-Champaign
  • National Institute of Food and Agriculture
PUBLISHED 13 Mar 2023
https://doi.org/10.12688/f1000research.128537.1
Research Article metrics
Association between mutant E6 and E7 Human Papilloma Virus Type 16 oncogenes with cyclin D1 expression in cervical cancer: Observational study in Bali
[version 1; peer review: 1 approved with reservations, 2 not approved]
I Nyoman Bayu Mahendra, I Nyoman Gede Budiana, I Gede Mega Putra, Anom Suardika, Anak Agung Gede Putra Wiradnyana, Alisza Novrita Sari
Peer Reviewers Jacyara Macedo; Eric Siegel; Atar Singh Kushwah
PUBLISHED 09 Mar 2023
https://doi.org/10.12688/f1000research.130888.1
Research Article metrics
Network biology of lapatinib resistance in different types of HER2-positive breast cancers informs the prioritization of the combination anticancer treatments as anti-resistance interventions
[version 1; peer review: 1 approved with reservations]
Bayan Alkhawaja, Anas Khaleel, Wael Abu Dayyih, Mohammed F. Hamad, Rima Hajjo, Mohammad Hailat
Peer Reviewers Wenjing Liu
PUBLISHED 09 Mar 2023
https://doi.org/10.12688/f1000research.130300.2
Review metrics
Revised
Self-empowerment of life through RNA networks, cells and viruses
[version 2; peer review: 4 approved]
Luis Villarreal, Guenther Witzany
Peer Reviewers František Baluška; Felix Broecker; Ascensión Ariza-Mateos; Jordi Gomez Castilla
LATEST VERSION PUBLISHED 06 Mar 2023
https://doi.org/10.12688/f1000research.113630.2
Study Protocol metrics
Revised
Assessing the impacts of conservation volunteering on participant wellbeing: a systematic review protocol
[version 2; peer review: 2 approved]
Hanna Nuuttila
Peer Reviewers Margaret Nohilly and Fionnula Tynan; Philip A. Martin
  • Funder
  • AXA Research Fund
LATEST VERSION PUBLISHED 06 Mar 2023
https://doi.org/10.12688/f1000research.127469.2
Brief Report metrics
Revised
The number of neutral mutants in an expanding Luria-Delbrück population is approximately Fréchet
[version 2; peer review: 2 approved]
Steven A. Frank
Peer Reviewers Qi Zheng; Pavol Bokes
  • Funders
  • U.S. Department of Defense
  • National Science Foundation
  • Donald Bren Foundation
LATEST VERSION PUBLISHED 03 Mar 2023
561-580 of 4,526 ARTICLES
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