Genomics and Genetics
Genomics and Genetics
Software Tool Article
metrics
Revised
LiftoffTools: a toolkit for comparing gene annotations mapped between genome assemblies
[version 2; peer review: 2 approved]
Peer Reviewers
Adam Frankish;
Mark Borodovsky
- Funder
- National Institutes of Health
Genome Note
metrics
Isolation and complete genome sequence of Aeromonas bacteriophage Gekk3-15
[version 1; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Ruben Avendaño-Herrera;
Ben Temperton and Liam Boot-Handford;
Reham M El Tarabili
- Funders
- Ministry of Science and Higher Education of the Russian Federation
- Biotechnology and Biological Sciences Research Council
Genome Note
metrics
Two draft genomes of enigmatic Solenogastres (Mollusca, Aplacophora) Epimenia babai and Neomenia megatrapezata
[version 1; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers
Gloria Arriagada;
Alice Dennis
- Funders
- Iridian Genomes
- National Science Foundation
Genome Note
metrics
Long-read datasets of Kayu Bawang (Azadirachta excelsa (Jack) Jacobs) from 3 different identified seed stands in Bengkulu (Sumatra), Indonesia and its phylogenetic relationships
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Hoang Dang Khoa Do;
Maria Stefanie Dwiyanti
- Funder
- Beasiswa Pendidikan Pascasarjana Dalam Negeri (BPPDN) 2019
Brief Report
metrics
Revised
Methylation risk score in peripheral blood predictive of conversion from mild cognitive impairment to Alzheimer's Disease
[version 2; peer review: 2 approved with reservations, 1 not approved]
Peer Reviewers
Adam Smith;
Rachel Cavill;
Lily Wang and Wei Zhang
- Funder
- National Heart, Lung, and Blood Institute
Research Article
metrics
Revised
Analysis of C9orf72 repeat expansions in Georgian patients with Amyotrophic lateral sclerosis (ALS)
[version 2; peer review: 2 approved]
Peer Reviewers
Karri Kaivola;
Naoki Suzuki
- Funders
- Synaptopathies Strategic Award
- Wellcome
- Medical Research Council
Research Article
metrics
Revised
PKD1 gene mutation and ultrasonographic characterization in cats with renal cysts
[version 3; peer review: 1 approved, 2 approved with reservations]
Peer Reviewers
Leslie A. Lyons;
224096;
Jin He
Research Article
metrics
Revised
Prevalence of Panton-Valentine leucocidin (pvl) and exfoliative toxin A (eta) gene within methicillin resistant and susceptible Staphylococcus aureus in an urban tertiary hospital: A molecular epidemiology pilot study
[version 3; peer review: 2 approved]
Peer Reviewers
Dewi Santosaningsih;
Amin Soebandrio
- Funder
- Universitas Sumatera Utara TALENTA
Genome Note
metrics
Revised
Plastid genome of Passiflora tripartita var. mollissima (poro-poro) from Huánuco, Peru
[version 3; peer review: 2 approved]
Peer Reviewers
Rahul G Shelke;
Abdullah Abdullah
- Funder
- Plant Sience Laboratory
Study Protocol
metrics
Revised
A protocol for cloning, expression, and purification of Lysine exporter (LysE) gene of Mycobacterium tuberculosis
[version 3; peer review: 2 approved]
Peer Reviewers
Seamus J. Martin and Seren Hamsici;
Dr. Rahul Sharma
Review
metrics
Revised
Association of melatonin receptor 1 A with litter size in sheep: A review
[version 2; peer review: 2 approved]
Peer Reviewers
Ugbo Emmanuel Nnabuike;
Wenjing You
- Funder
- Universitas Airlangga
Research Article
metrics
Revised
Identification of the SIRT1 gene's most harmful non-synonymous SNPs and their effects on functional and structural features-an in silico analysis
[version 2; peer review: 2 approved]
Peer Reviewers
Laxminarayana Kurady Bairy;
Bhushan L. Thakur
- Funder
- Not Applicable
Software Tool Article
metrics
Peer Reviewers
Berend Snel;
Daofeng Li;
Jung-Wan Mok;
Elise Parey
- Funder
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
Research Article
metrics
Identification of pathogenic-specific open reading frames in staphylococci species
[version 1; peer review: 2 not approved]
Peer Reviewers
Gisela Storz;
Vishnu Raghuram
Research Article
metrics
Revised
The first released available genome of the common ice plant (Mesembryanthemum crystallinum L.) extended the research region on salt tolerance, C3-CAM photosynthetic conversion, and halophilism
[version 4; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Qijie Guan;
Xin-Guang Zhu;
Zbigniew Miszalski
- Funder
- JSPS KAKENHI
Software Tool Article
metrics
Revised
scANANSE gene regulatory network and motif analysis of single-cell clusters
[version 2; peer review: 2 approved]
Peer Reviewers
Kenji Kamimoto;
Marouen Ben Guebila
- Funders
- NWO grant 016 Vidi
- NWO-ALW
- ZonMw Open
Research Article
metrics
Revised
Mutation spectrum analysis of DMD gene in Indonesian Duchenne and Becker muscular dystrophy patients
[version 3; peer review: 2 approved]
Peer Reviewers
Teguh Haryo Sasongko;
Luca Bello
- Funder
- NUS-UGM-Tahir Foundation grant
Genome Note
metrics
Revised
The genome sequence of the critically endangered Kroombit tinkerfrog (Taudactylus pleione)
[version 2; peer review: 3 approved]
Peer Reviewers
Natalie Forsdick;
Sandra Goutte;
Matheus Azambuja
- Funders
- Australian Federal Government Bushfire Recovery Scheme
- Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science
- NCRIS supported Bioplatforms Australia Threatened Species Initiative
Method Article
metrics
Revised
Unraveling the timeline of gene expression: A pseudotemporal trajectory analysis of single-cell RNA sequencing data
[version 2; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Michael D Morgan;
Koen Van den berge;
Anna Alemany, Xuan Quy Nguyen and Noëlle Dommann
- Funders
- National Health and Medical Research Council
- Chan Zuckerberg Initiative
- Medical Research Future Fund
Research Article
metrics
Exploring the genetic landscape of neurotransmitter alterations in hypoxic-ischemic encephalopathy: A personalized medicine perspective
[version 1; peer review: 1 approved with reservations]
Peer Reviewers
Raffaele Falsaperla
- Funder
- Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)