Genomics and Genetics
Genomics and Genetics
Genome Note
metrics
Isolation and complete genome sequence of Citrobacter bacteriophage Ursula
[version 1; peer review: 1 approved]
Peer Reviewers
Donus Gencer
- Funder
- Ministry of Science and Higher Education of the Russian Federation
Genome Note
metrics
The genome sequence of the Violet Copper, Lycaena helle (Denis & Schiffermüller, 1775)
[version 1; peer review: 2 approved]
Peer Reviewers
Panagiotis Ioannidis;
Sivasankaran Kuppusamy
Research Article
metrics
Revised
Phenotypic and genetic extended spectrum beta lactamase profiles of bacterial isolates from ICU in tertiary level hospital in Kenya
[version 2; peer review: 2 approved]
Peer Reviewers
Upendo O Kibwana;
Tajudeen Oladunni GANIYU
- Funder
- Not funded
Genome Note
metrics
A compilation of histidine kinase genes in Enterobacter hormaechei strain HCF3 isolated from the North West Province of South Africa
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Reetika Debroy;
Angeliki Mavroidi
- Funder
- National Research Foundation (NRF)
Research Article
metrics
Revised
NCBench: providing an open, reproducible, transparent, adaptable, and continuous benchmark approach for DNA-sequencing-based variant calling
[version 2; peer review: 2 approved]
Peer Reviewers
Justin M. Zook;
Kez Cleal
- Funders
- German Federal Ministry for Education and Research
- Deutsche Forschungsgemeinschaft
Research Article
metrics
Revised
Improving genomic prediction of rhizomania resistance in sugar beet (Beta vulgaris L.) by implementing epistatic effects and feature selection
[version 2; peer review: 1 approved with reservations, 3 not approved]
Peer Reviewers
J Mitchell McGrath;
Muhammad Massub Tehseen;
Daniela Holtgräwe;
Chenggen Chu
Genome Note
metrics
Revised
A reference genome, mitochondrial genome and associated transcriptomes for the critically endangered swift parrot (Lathamus discolor)
[version 2; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Charles Feigin;
Phred Benham;
Joan Ferrer Obiol
- Funders
- NCRIS funded BioPlatforms Threatened Species Initiative
- Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science
Research Article
metrics
Comprehensive Analysis of Demographic, Clinical, and Genetic Characteristics in Acute Myocardial Infarction Patients
[version 1; peer review: 1 not approved]
Peer Reviewers
Jaroslav A Hubacek
Genome Note
metrics
Revised
The genomes of the aquarium sponges Tethya wilhelma and Tethya minuta (Porifera: Demospongiae)
[version 2; peer review: 2 approved]
Peer Reviewers
Bernie Degnan;
Eric Bautista-Guerrero
- Funders
- Deutsche Forschungsgemeinschaft
- Villum Fonden
- H2020 Marie Skłodowska-Curie Actions
- LMUexcellent
Data Note
metrics
Revised
A compilation of histidine kinase genes in the genome of a tissue macerating Pectobacterium brasiliense isolated from potato in South Africa
[version 2; peer review: 1 approved]
Peer Reviewers
Iris Yedidia
Research Article
metrics
Revised
Cloning and characterization of the LvCTL genes encoding C-type lectin from white-leg shrimp (Litopenaeus vannamei)
[version 3; peer review: 2 approved, 2 approved with reservations]
Peer Reviewers
Hieu Tran-Van;
Mengqiang Wang;
Ta-Hui Lin;
Parin Chaivisuthangkura
- Funders
- Vietnam program of National Gene Fund
- National Foundation for Science and Technology Development
Research Article
metrics
Revised
The identification of retro-DNAs in primate genomes as DNA transposons mobilizing via retrotransposition
[version 3; peer review: 2 approved]
Peer Reviewers
Rene Massimiliano Marsano;
Shengjun Tan
- Funders
- Natural Sciences and Engineering Research Council of Canada
- Ontario Research Foundation
- Canada Foundation for Innovation
- Canada Research Chairs
Research Article
metrics
Revised
Exploring the moderating effects of SIRT1 and gene polymorphisms rs7895833 on the relationship between hemoglobin levels and physical frailty in elderly adults with comorbid chronic diseases: A moderated mediation analysis
[version 3; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Ramu Manjula;
Amit Singh;
Made Putra Semadhi
- Funder
- Universitas Sumatera Utara
Software Tool Article
metrics
Revised
LiftoffTools: a toolkit for comparing gene annotations mapped between genome assemblies
[version 2; peer review: 2 approved]
Peer Reviewers
Adam Frankish;
Mark Borodovsky
- Funder
- National Institutes of Health
Genome Note
metrics
Isolation and complete genome sequence of Aeromonas bacteriophage Gekk3-15
[version 1; peer review: 2 approved, 1 approved with reservations]
Peer Reviewers
Ruben Avendaño-Herrera;
Ben Temperton and Liam Boot-Handford;
Reham M El Tarabili
- Funders
- Ministry of Science and Higher Education of the Russian Federation
- Biotechnology and Biological Sciences Research Council
Genome Note
metrics
Two draft genomes of enigmatic Solenogastres (Mollusca, Aplacophora) Epimenia babai and Neomenia megatrapezata
[version 1; peer review: 1 approved, 1 approved with reservations]
Peer Reviewers
Gloria Arriagada;
Alice Dennis
- Funders
- Iridian Genomes
- National Science Foundation
Genome Note
metrics
Long-read datasets of Kayu Bawang (Azadirachta excelsa (Jack) Jacobs) from 3 different identified seed stands in Bengkulu (Sumatra), Indonesia and its phylogenetic relationships
[version 1; peer review: 2 approved with reservations]
Peer Reviewers
Hoang Dang Khoa Do;
Maria Stefanie Dwiyanti
- Funder
- Beasiswa Pendidikan Pascasarjana Dalam Negeri (BPPDN) 2019
Brief Report
metrics
Revised
Methylation risk score in peripheral blood predictive of conversion from mild cognitive impairment to Alzheimer's Disease
[version 2; peer review: 2 approved with reservations, 1 not approved]
Peer Reviewers
Adam Smith;
Rachel Cavill;
Lily Wang and Wei Zhang
- Funder
- National Heart, Lung, and Blood Institute
Research Article
metrics
Revised
Analysis of C9orf72 repeat expansions in Georgian patients with Amyotrophic lateral sclerosis (ALS)
[version 2; peer review: 2 approved]
Peer Reviewers
Karri Kaivola;
Naoki Suzuki
- Funders
- Synaptopathies Strategic Award
- Wellcome
- Medical Research Council
Research Article
metrics
Revised
PKD1 gene mutation and ultrasonographic characterization in cats with renal cysts
[version 3; peer review: 1 approved, 2 approved with reservations]
Peer Reviewers
Leslie A. Lyons;
224096;
Jin He